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pyrF protein (Porphyromonas gingivalis W83) - STRING interaction network
"pyrF" - Orotidine 5'-monophosphate decarboxylase in Porphyromonas gingivalis W83
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pyrFOrotidine 5’-monophosphate decarboxylase (276 aa)    
Predicted Functional Partners:
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) (210 aa)
 
  0.999
cmk
Cytidylate kinase (231 aa)
   
 
    0.988
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP (239 aa)
   
 
  0.984
carB
Carbamoyl-phosphate synthase large subunit (1075 aa)
   
  0.976
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with NAD(+) as electron acceptor (307 aa)
   
  0.960
pyrB
Aspartate carbamoyltransferase (304 aa)
 
 
  0.938
PG_2055
Dihydroorotate dehydrogenase 2; Catalyzes the conversion of dihydroorotate to orotate (326 aa)
   
  0.937
PG_0075
Phosphoribosylformylglycinamidine cyclo-ligase (413 aa)
 
   
  0.935
carA
Carbamoyl phosphate synthase small subunit (357 aa)
   
 
  0.913
pyrC
Dihydroorotase (449 aa)
   
 
  0.891
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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