STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oxyRRedox-sensitive transcriptional activator OxyR; Similar to GB:L04510, SP:P36406, and PID:292070; identified by sequence similarity; putative; Belongs to the LysR transcriptional regulatory family. (308 aa)    
Predicted Functional Partners:
PG_0174
Pyridine nucleotide-disulphide oxidoreductase family protein; Belongs to the sulfur carrier protein TusA family.
  
  
 0.705
PG_1797
DNA-binding response regulator/sensor histidine kinase.
   
  
 0.647
rprY
DNA-binding response regulator RprY; Similar to GB:L27624, GB:D29992, SP:P48307, PID:2078462, PID:441150, PID:484051, GB:L27624, GB:D29992, SP:P48307, PID:2078462, PID:441150, and PID:484051; identified by sequence similarity; putative.
  
  
 0.635
ssb
Single-stranded binding protein; Similar to GB:L04572, SP:P28689, GB:L05381, PID:145787, PID:146393, GB:U00096, PID:1736484, and PID:1788147; identified by sequence similarity; putative.
  
    0.616
rbr
Rubrerythrin; May provide oxidative stress protection via catalytic reduction of intracellular hydrogen peroxide.
     
 0.595
xth
Exodeoxyribonuclease III.
     
 0.587
bcp
Bacterioferritin comigratory protein; Similar to GB:L19338, SP:P37926, PID:349136, GB:M26665, GB:M18372, GB:L05514, SP:P15515, SP:P15516, PID:179466, PID:184058, and PID:292146; identified by sequence similarity; putative.
      
 0.564
PG_0011
Glycosyl hydrolase, family 3.
      
 0.551
sodB
Superoxide dismutase, Fe-Mn; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the iron/manganese superoxide dismutase family.
     
 0.513
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
      
 0.510
Your Current Organism:
Porphyromonas gingivalis
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.