STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0289Hypothetical protein; Identified by Glimmer2; putative. (346 aa)    
Predicted Functional Partners:
PG_0290
Hypothetical protein; Identified by Glimmer2; putative.
 
 
 
 0.999
PG_0288
Lipoprotein, putative.
 
   
 0.973
PG_0291
Hypothetical protein; Identified by Glimmer2; putative.
 
   
 0.971
PG_0287
Hypothetical protein; Identified by Glimmer2; putative.
 
   
 0.943
PG_1947
TPR domain protein; Identified by match to TIGR protein family HMM TIGR01696.
  
   
 0.860
PG_0809
Hypothetical protein; Identified by Glimmer2; putative.
  
   
 0.852
porT
porT protein.
 
   
 0.815
PG_0810
Hypothetical protein; Identified by Glimmer2; putative.
  
   
 0.801
PG_0027
Hypothetical protein; Identified by Glimmer2; putative.
  
   
 0.774
PG_1035
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.771
Your Current Organism:
Porphyromonas gingivalis
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.