STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galEUDP-glucose 4-epimerase; Similar to GB:M31516, GB:M30142, SP:P08174, and PID:181476; identified by sequence similarity; putative; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (342 aa)    
Predicted Functional Partners:
galK
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 
 
 0.956
galM
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
  
 0.951
PG_1143
Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family.
  
 
 0.932
PG_1954
NAD dependent epimerase/reductase-related protein.
  
 0.909
engB
GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
       0.810
PG_0349
Hydrolase, haloacid dehalogenase-like family; Similar to SP:Q05426, and PID:150149; identified by sequence similarity; putative.
     
 0.674
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
       0.634
PG_0344
Purple acid phosphatase.
  
    0.569
PG_0118
Glycosyl transferase, group 2 family protein.
 
  
 0.565
xerD
Integrase/recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
      
 0.546
Your Current Organism:
Porphyromonas gingivalis
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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