STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0352Sialidase, putative; Similar to GB:L04751, SP:Q02928, PID:181397, PID:535787, PID:994758, GB:L04751, SP:Q02928, PID:181397, PID:535787, and PID:994758; identified by sequence similarity; putative. (526 aa)    
Predicted Functional Partners:
PG_0085
Alpha-galactosidase; Similar to GB:M98276, SP:Q04633, PID:151024, and PID:45364; identified by sequence similarity; putative.
     
  0.900
PG_0664
Oxidoreductase, Gfo/Idh/MocA family; Glycosidase; Belongs to the Gfo/Idh/MocA family. Glycosyl hydrolase 109 subfamily.
 
   
 0.657
PG_1697
Type II restriction endonuclease, putative; Possibly an isoschizomer of LlaBIIR.
  
    0.627
nahA
Beta-hexosaminidase; Similar to GB:D14662, SP:P30041, PID:285949, GB:D14662, SP:P30041, and PID:285949; identified by sequence similarity; putative; Belongs to the glycosyl hydrolase 20 family.
 
 
 0.590
PG_0861
Helicase, SNF2/RAD54 family; Similar to GB:M36711, GB:M61156, GB:X77343, and SP:P05549; identified by sequence similarity; putative.
   
    0.538
PG_0868
Mobilization protein; Similar to GB:X59892, GB:X67918, GB:X67919, GB:X67920, GB:X67921, GB:X67922, GB:X67923, GB:X67924, GB:X67926, GB:X67927, GB:X67928, GB:X71411, GB:X63742, GB:M61715, GB:M77804, SP:P23381, PID:184657, PID:30821, PID:32709, PID:340368, GB:X59892, GB:X67918, GB:X67919, GB:X67920, GB:X67921, GB:X67922, GB:X67923, GB:X67924, GB:X67926, GB:X67927, GB:X67928, GB:X71411, GB:X63742, GB:M61715, GB:M77804, SP:P23381, PID:184657, PID:30821, PID:32709, PID:340368, GB:X59892, GB:X67918, GB:X67919, GB:X67920, GB:X67921, GB:X67922, GB:X67923, GB:X67924, GB:X67926, GB:X67927, GB:X6 [...]
  
     0.520
PG_1750
Alpha-1,3/4-fucosidase, putative; Identified by match to PFAM protein family HMM PF00754.
 
  
 0.502
PG_1214
Hypothetical protein; Identified by Glimmer2; putative.
   
    0.474
PG_0351
Hypothetical protein; Identified by Glimmer2; putative.
       0.473
Your Current Organism:
Porphyromonas gingivalis
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.