STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0517Hypothetical protein; Identified by Glimmer2; putative. (960 aa)    
Predicted Functional Partners:
PG_2072
UvrD/REP helicase domain protein.
 
 
 0.990
PG_0515
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
     0.735
PG_1189
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.714
PG_1098
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.700
PG_0516
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.678
PG_1999
Conserved hypothetical protein; Similar to GB:U01032, and PID:393012; identified by sequence similarity; putative.
  
     0.619
PG_0172
Exonuclease.
  
    0.600
PG_1303
Helicase, putative; Similar to GB:M67471, SP:P25146, PID:149674, PID:887026, PID:887868, PID:887874, SP:P23462, and PID:152000; identified by sequence similarity; putative.
  
   
 0.581
rpmC
Ribosomal protein L29; Similar to GB:M18157, GB:S39329, and SP:P20151; identified by sequence similarity; putative; Belongs to the universal ribosomal protein uL29 family.
  
     0.554
PG_0518
Abortive infection protein family.
       0.549
Your Current Organism:
Porphyromonas gingivalis
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.