STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0528Amidophosphoribosyltransferase, putative; Similar to GB:J05068, SP:P20061, and PID:307479; identified by sequence similarity; putative. (627 aa)    
Predicted Functional Partners:
purD
Phosphoribosylamine--glycine ligase; Belongs to the GARS family.
 0.998
carB
Carbamoyl-phosphate synthase, large subunit; Similar to GB:M34462, GB:M35670, GB:M36805, GB:X65787, GB:Y00809, GB:Z26248, SP:P13727, PID:182080, PID:187415, PID:306839, PID:31137, PID:312045, PID:34476, and PID:400414; identified by sequence similarity; putative.
  
 
 0.988
carA
Carbamoyl-phosphate synthase, small subunit; Similar to GB:L20573, SP:P42332, PID:437315, SP:Q03638, GB:X59399, and PID:45986; identified by sequence similarity; putative; Belongs to the CarA family.
  
 
 0.986
purL
Phosphoribosylformylglycinamidine synthase, putative; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
 
 
 0.985
PG_0075
Phosphoribosylformylglycinamidine cyclo-ligase, putative; Similar to GB:X80821, and PID:527580; identified by sequence similarity; putative.
 
  
 0.965
prsA
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
  
 0.933
purH
Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase.
 
 
 0.922
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
 
 
 0.916
purB
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
 
 
 0.914
gltD
Glutamate synthase, small subunit; Similar to GB:L19221, and PID:410147; identified by sequence similarity; putative.
  
 
 0.912
Your Current Organism:
Porphyromonas gingivalis
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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