STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cydBCytochrome d ubiquinol oxidase, subunit II; Similar to GB:X59066, GB:X65460, GB:D28126, GB:D14710, SP:P25705, PID:28938, PID:34468, PID:559317, and PID:559325; identified by sequence similarity; putative. (387 aa)    
Predicted Functional Partners:
cydA
Cytochrome d ubiquinol oxidase, subunit I; Similar to SP:P11697; identified by sequence similarity; putative; Belongs to the cytochrome ubiquinol oxidase subunit 1 family.
 
 
 0.999
PG_0901
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
   
 0.936
frdB
Fumarate reductase, iron-sulfur protein.
     
 0.700
frdA
Fumarate reductase, flavoprotein subunit.
     
 0.627
dprA
DNA processing protein DprA, putative; Similar to GB:M33916, GB:M37840, PID:1008917, PID:1008919, PID:149926, and PID:149976; identified by sequence similarity; putative.
      
 0.543
PG_0548
Pyruvate ferredoxin/flavodoxin oxidoreductase family protein.
     
 0.509
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
  
 0.500
PG_1616
Conserved hypothetical protein; Identified by Glimmer2; putative.
     
  0.499
PG_0898
Conserved hypothetical protein; Similar to GB:D10483, SP:P06137, GB:K02668, GB:M36531, GB:X02821, PID:146025, PID:146032, PID:216508, PID:40862, PID:41494, GB:U00096, PID:1786282, GB:D10483, SP:P06137, GB:K02668, GB:M36531, GB:X02821, PID:146025, PID:146032, PID:216508, PID:40862, PID:41494, GB:U00096, and PID:1786282; identified by sequence similarity; putative.
  
    0.483
dinF
DNA-damage-inducible protein F.
      
 0.479
Your Current Organism:
Porphyromonas gingivalis
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.