STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_0901Conserved hypothetical protein; Identified by Glimmer2; putative. (82 aa)    
Predicted Functional Partners:
cydB
Cytochrome d ubiquinol oxidase, subunit II; Similar to GB:X59066, GB:X65460, GB:D28126, GB:D14710, SP:P25705, PID:28938, PID:34468, PID:559317, and PID:559325; identified by sequence similarity; putative.
 
   
 0.936
cydA
Cytochrome d ubiquinol oxidase, subunit I; Similar to SP:P11697; identified by sequence similarity; putative; Belongs to the cytochrome ubiquinol oxidase subunit 1 family.
 
   
 0.926
PG_1618
Conserved hypothetical protein; Similar to GB:L10975, GB:L10975, PID:425446, GB:L10975, GB:L10975, and PID:425446; identified by sequence similarity; putative.
  
     0.621
PG_1352
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.510
PG_0902
Alpha-1,2-mannosidase family protein.
       0.455
PG_1236
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.440
Your Current Organism:
Porphyromonas gingivalis
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.