STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1014TPR domain protein. (670 aa)    
Predicted Functional Partners:
PG_1797
DNA-binding response regulator/sensor histidine kinase.
  
 
 0.764
PG_1130
TPR domain protein.
 
    0.703
PG_0982
TPR domain protein.
 
 
   0.692
polA
DNA polymerase type I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 
 0.687
PG_1967
TPR domain protein; Similar to GB:L12710, and PID:414576; identified by sequence similarity; putative.
 
    0.631
PG_2200
TPR domain protein; Similar to SP:P27029, GB:X57299, and PID:47906; identified by sequence similarity; putative.
 
   0.581
guaB
Inosine-5'-monophosphate dehydrogenase.
     
 0.564
PG_0323
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
    0.514
PG_1496
Hypothetical protein; Identified by Glimmer2; putative.
   
    0.508
PG_1209
Hypothetical protein; Identified by Glimmer2; putative.
   
    0.499
Your Current Organism:
Porphyromonas gingivalis
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.