STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1069Alcohol dehydrogenase, zinc-containing, putative. (347 aa)    
Predicted Functional Partners:
PG_1068
Conserved hypothetical protein; Similar to SP:P13685, GB:D26562, GB:M20574, GB:S48039, PID:147117, PID:259663, PID:473802, GB:U00096, and PID:1786336; identified by sequence similarity; putative.
 
  
 0.989
kamD
D-lysine 5,6-aminomutase, alpha subunit.
 
 
 0.986
kamE
D-lysine 5,6-aminomutase, beta subunit.
 
  
 0.985
PG_1067
Conserved hypothetical protein; Similar to GP:19713115; identified by sequence similarity; putative.
 
   
 0.915
PG_0148
Sigma-54-dependent transcriptional regulator.
 
      0.892
PG_1071
Conserved hypothetical protein; Similar to GP:19713109; identified by sequence similarity; putative.
 
     0.870
PG_0747
Sigma-54 dependent DNA-binding response regulator; Similar to GB:X06182, GB:S68472, GB:X65959, GB:X69301, GB:X69302, GB:X69303, GB:X69304, GB:X69305, GB:X69306, GB:X69307, GB:X69308, GB:X69309, GB:X69310, GB:X69311, GB:X69312, GB:X69313, GB:X69314, GB:X69315, GB:X69316, GB:X72595, GB:X72599, SP:P10721, PID:34087, PID:825686, GB:X06182, GB:S68472, GB:X65959, GB:X69301, GB:X69302, GB:X69303, GB:X69304, GB:X69305, GB:X69306, GB:X69307, GB:X69308, GB:X69309, GB:X69310, GB:X69311, GB:X69312, GB:X69313, GB:X69314, GB:X69315, GB:X69316, GB:X72595, GB:X72599, SP:P10721, PID:34087, and PID:8256 [...]
 
      0.855
maeB
NADP-dependent malic enzyme; Similar to GB:D90452, GB:D90453, GB:M64110, GB:M83216, SP:Q05682, PID:180195, GB:D90452, GB:D90453, GB:M64110, GB:M83216, SP:Q05682, PID:180195, GB:D90452, GB:D90453, GB:M64110, GB:M83216, SP:Q05682, PID:180195, GB:D90452, GB:D90453, GB:M64110, GB:M83216, SP:Q05682, PID:180195, SP:P08531, PID:40946, GB:U00096, PID:1736558, PID:1736563, and PID:1788210; identified by sequence similarity; putative.
  
  
 0.789
mutB
methylmalonyl-CoA mutase, large subunit; Catalyzes the isomerization of succinyl-CoA to methylmalonyl- CoA during synthesis of propionate from tricarboxylic acid-cycle intermediates.
  
  
 0.752
PG_0016
Sigma-54 dependent DNA-binding response regulator.
 
      0.748
Your Current Organism:
Porphyromonas gingivalis
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.