STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
porSporS protein; Identified by match to TIGR protein family HMM TIGR01695. (435 aa)    
Predicted Functional Partners:
porR
Pigmentation and extracellular proteinase regulator; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.911
PG_1136
Conserved hypothetical protein; Similar to GP:18892817; identified by sequence similarity; putative.
 
    0.834
PG_1143
Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.625
PG_0119
Glycosyl transferase, WecB/TagA/CpsF family; Similar to GB:M26167, SP:P10720, and PID:292390; identified by sequence similarity; putative; Belongs to the glycosyltransferase 26 family.
  
  
 0.614
PG_0002
Hexapeptide transferase family protein; Similar to GB:U03884, GB:U12541, GB:U12542, GB:U12544, GB:U12545, GB:S78737, GB:U12543, SP:P48048, PID:1698659, PID:1698660, PID:1698661, PID:1698662, PID:1698663, PID:1698664, PID:433143, PID:529313, PID:529315, PID:529317, PID:639911, and PID:639912; identified by sequence similarity; putative.
 
  
 0.572
rfbB
dTDP-glucose 4,6-dehydratase; Similar to SP:P02345, GB:X04500, GB:M15330, GB:K02770, GB:M54933, GB:X02532, GB:X56087, GB:X52431, GB:M15840, SP:P01584, PID:186288, PID:307043, PID:307045, PID:312408, PID:33790, PID:35663, and PID:386816; identified by sequence similarity; putative; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.563
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.563
PG_0116
Conserved hypothetical protein; Identified by Glimmer2; putative.
     
 0.550
PG_0160
Conserved domain protein; Similar to GB:D10483, SP:P11288, PID:216438, PID:537248, PID:1128976, GB:U00096, and PID:1786187; identified by sequence similarity; putative.
  
  
 0.515
rfbA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.515
Your Current Organism:
Porphyromonas gingivalis
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.