STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1179Conserved hypothetical protein; Identified by Glimmer2; putative. (263 aa)    
Predicted Functional Partners:
PG_1180
Membrane protein, putative; Similar to SP:P19371; identified by sequence similarity; putative.
  
 0.986
PG_1178
Hypothetical protein; Identified by Glimmer2; putative.
 
   
 0.978
PG_1058
OmpA family protein.
 
 
 0.621
PG_1181
Transcriptional regulator, tetR family.
 
   
 0.605
PG_1176
ABC transporter, ATP-binding protein, putative.
 
   
 0.598
PG_1175
ABC transporter, ATP-binding protein, putative.
 
   
 0.553
PG_1048
N-acetylmuramoyl-L-alanine amidase, family 3.
    
   0.519
PG_0922
Membrane protein, putative.
 
 
 
 0.517
PG_0282
ABC transporter, ATP-binding protein; Similar to GB:Z27456, GB:Z29610, GB:Z29611, GB:Z30082, GB:Z18918, PID:1335183, PID:505397, PID:553415, PID:553456, PID:598160, PID:780285, and PID:860980; identified by sequence similarity; putative.
   
 
 0.456
PG_0685
ABC transporter, ATP-binding protein.
   
 
 0.456
Your Current Organism:
Porphyromonas gingivalis
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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