Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PG_0081 | PG_0290 | PG_0081 | PG_0290 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.684 |
PG_0081 | PG_0291 | PG_0081 | PG_0291 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.661 |
PG_0081 | PG_0362 | PG_0081 | PG_0362 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.694 |
PG_0081 | PG_0759 | PG_0081 | PG_0759 | Hypothetical protein; Identified by Glimmer2; putative. | TPR domain protein. | 0.623 |
PG_0081 | PG_1240 | PG_0081 | PG_1240 | Hypothetical protein; Identified by Glimmer2; putative. | Transcriptional regulator, tetR family. | 0.531 |
PG_0081 | PG_1304 | PG_0081 | PG_1304 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.750 |
PG_0081 | PG_1372 | PG_0081 | PG_1372 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.514 |
PG_0081 | PG_1835 | PG_0081 | PG_1835 | Hypothetical protein; Identified by Glimmer2; putative. | Lipoprotein, putative. | 0.585 |
PG_0081 | ompH-1 | PG_0081 | PG_0192 | Hypothetical protein; Identified by Glimmer2; putative. | Cationic outer membrane protein OmpH. | 0.689 |
PG_0290 | PG_0081 | PG_0290 | PG_0081 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.684 |
PG_0290 | PG_0291 | PG_0290 | PG_0291 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.969 |
PG_0290 | PG_0362 | PG_0290 | PG_0362 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.747 |
PG_0290 | PG_0759 | PG_0290 | PG_0759 | Hypothetical protein; Identified by Glimmer2; putative. | TPR domain protein. | 0.601 |
PG_0290 | PG_1240 | PG_0290 | PG_1240 | Hypothetical protein; Identified by Glimmer2; putative. | Transcriptional regulator, tetR family. | 0.520 |
PG_0290 | PG_1304 | PG_0290 | PG_1304 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.711 |
PG_0290 | PG_1372 | PG_0290 | PG_1372 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.680 |
PG_0290 | PG_1835 | PG_0290 | PG_1835 | Hypothetical protein; Identified by Glimmer2; putative. | Lipoprotein, putative. | 0.765 |
PG_0290 | ompH-1 | PG_0290 | PG_0192 | Hypothetical protein; Identified by Glimmer2; putative. | Cationic outer membrane protein OmpH. | 0.631 |
PG_0291 | PG_0081 | PG_0291 | PG_0081 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.661 |
PG_0291 | PG_0290 | PG_0291 | PG_0290 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.969 |
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