STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dpp11Conserved hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. (720 aa)    
Predicted Functional Partners:
ptpA
Dipeptidyl aminopeptidase IV, putative; Serine proteinase. Releases tripeptides from the free amino terminus of proteins. Has a requirement for Pro in the P1 position, but is inactivated by Pro in the P1' position.
  
   
 0.864
dpp
Dipeptidyl aminopeptidase IV.
  
   
 0.740
PG_1282
Conserved hypothetical protein; Similar to GB:U22662, and PID:726513; identified by sequence similarity; putative.
       0.681
PG_1281
Hypothetical protein; Identified by Glimmer2; putative.
       0.642
dacA
Conserved hypothetical protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.
      
 0.544
ansA
L-asparaginase.
      
 0.542
PG_2102
Immunoreactive 61 kDa antigen PG91.
  
     0.533
PG_0724
Prolyl oligopeptidase family protein.
  
     0.483
PG_0294
Glycosyl transferase, group 2 family protein.
  
     0.464
PG_1285
Glucosamine-6-phosphate isomerase, putative.
       0.456
Your Current Organism:
Porphyromonas gingivalis
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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