STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1828Lipoprotein, putative. (70 aa)    
Predicted Functional Partners:
PG_0180
Lipoprotein, putative.
      
 0.495
PG_0924
5'-nucleotidase, lipoprotein e(P4) family; Identified by match to TIGR protein family HMM TIGR01680.
      
 0.495
PG_1767
Lipoprotein, putative.
      
 0.495
PG_2105
Lipoprotein, putative.
      
 0.495
PG_1829
long-chain-fatty-acid--CoA ligase, putative; Similar to GB:M68061, SP:P04740, PID:147073, and PID:41881; identified by sequence similarity; putative.
       0.462
Your Current Organism:
Porphyromonas gingivalis
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.