STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_18545-formyltetrahydrofolate cyclo-ligase family protein; Similar to GB:U02373, PID:407279, and PID:1100880; identified by sequence similarity; putative; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. (185 aa)    
Predicted Functional Partners:
folD
Methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
 
  
 0.939
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
  
 
 0.922
PG_0325
Conserved hypothetical protein; Similar to GB:X76383, PID:434360, GB:X76383, and PID:434360; identified by sequence similarity; putative.
    
 0.918
PG_0329
Formiminotransferase-cyclodeaminase-related protein; Similar to GB:M22589, SP:P13423, and PID:143282; identified by sequence similarity; putative.
     
  0.900
PG_1855
Carboxyl-terminal protease; Belongs to the peptidase S41A family.
       0.818
PG_1856
Cytidine/deoxycytidylate deaminase family protein; Similar to SP:P13063, and SP:P13064; identified by sequence similarity; putative.
  
    0.811
PG_1857
Conserved hypothetical protein; Similar to GP:19916677; identified by sequence similarity; putative.
       0.556
PG_1403
Rhomboid family protein.
  
    0.499
PG_1404
Rhomboid family protein.
  
    0.499
pheT
phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
  
 0.472
Your Current Organism:
Porphyromonas gingivalis
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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