STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1977Hypothetical protein; Identified by Glimmer2; putative. (668 aa)    
Predicted Functional Partners:
PG_0569
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.762
PG_1102
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.736
PG_0535
Conserved hypothetical protein; Similar to GB:M24141, SP:P14924, and PID:155614; identified by sequence similarity; putative.
 
     0.709
PG_1978
Hypothetical protein; Identified by Glimmer2; putative.
       0.682
PG_2157
Glutamine cyclotransferase-related protein; Similar to GB:M61877, GB:M11049, GB:M61775, GB:M13233, SP:P02549, PID:182243, PID:338438, PID:460309, and PID:553648; identified by sequence similarity; putative.
 
     0.677
PG_1100
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.619
PG_1691
Conserved domain protein.
  
     0.612
PG_0785
tonB protein, putative.
  
     0.609
PG_0452
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
     0.582
PG_0191
Outer membrane protein, putative.
 
     0.567
Your Current Organism:
Porphyromonas gingivalis
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.