Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ORW78316.1 | ORW79556.1 | AWC25_07000 | AWC25_04730 | Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.465 |
ORW78905.1 | ORW79556.1 | AWC25_05045 | AWC25_04730 | Alpha-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.420 |
ORW79543.1 | ORW79556.1 | AWC25_04735 | AWC25_04730 | ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.813 |
ORW79556.1 | ORW78316.1 | AWC25_04730 | AWC25_07000 | Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.465 |
ORW79556.1 | ORW78905.1 | AWC25_04730 | AWC25_05045 | Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alpha-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.420 |
ORW79556.1 | ORW79543.1 | AWC25_04730 | AWC25_04735 | Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.813 |
ORW79556.1 | ORW84206.1 | AWC25_04730 | AWC25_25275 | Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | acyl-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CoA-transferase III family. | 0.533 |
ORW79556.1 | mdh | AWC25_04730 | AWC25_10090 | Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.738 |
ORW84206.1 | ORW79556.1 | AWC25_25275 | AWC25_04730 | acyl-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CoA-transferase III family. | Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.533 |
mdh | ORW79556.1 | AWC25_10090 | AWC25_04730 | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.738 |