STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORW77488.1LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa)    
Predicted Functional Partners:
ORW77489.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
ORW85759.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.940
ORW73283.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.925
ORW86284.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.909
ORW76930.1
Stage II sporulation protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.888
ORW76754.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.888
ORW74846.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.888
ORW78836.1
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
0.776
ORW86285.1
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.770
AWC25_08550
Hypothetical protein; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.751
Your Current Organism:
Mycobacterium sherrisii
NCBI taxonomy Id: 243061
Other names: ATCC BAA-832, DSM 45441, M. sherrisii, Mycobacterium sherrisii van Ingen et al. 2011, strain 4773
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