Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RB10075Hypothetical protein-transmembrane prediction. (485 aa)    
Predicted Functional Partners:
RB10074
Conserved hypothetical protein-putative SAM-dependent methyltransferase; Best DB hits: BLAST: pir:G69742; hypothetical protein ybaJ - Bacillus subtilis -----; E=7e-13 pir:E83313; conserved hypothetical protein PA2650 [imported] -; E=9e-12 pir:S76919; hypothetical protein - Synechocystis sp. (strain PCC; E=6e-04 COG: BS_ybaJ; COG0500 SAM-dependent methyltransferases; E=7e-14 XF2471; COG2227; E=0.004.
       0.532
RB10077
Hypothetical protein-putative secreted lipoprotein.
       0.470
Your Current Organism:
Rhodopirellula baltica
NCBI taxonomy Id: 243090
Other names: Pirellula sp. 1, R. baltica SH 1, Rhodopirellula baltica SH 1, Rhodopirellula baltica str. SH 1, Rhodopirellula baltica strain SH 1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.