Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RB10252 | htrA | RB10252 | RB10249 | Best DB hits: BLAST: embl:CAA51674.1; (X73149) Nourseothricin acetyltransferase; E=0.069 gb:AAD47630.1; AF156670_1 (AF156670) nourseothricin; E=0.069 pir:E69786; ribosomal-protein-alanine N-acetyltransfer homolog ydiD; E=0.081 COG: BS_ydiD; COG0456 Acetyltransferases; E=0.008 PFAM: PF00583; Acetyltransferase (GNAT) family; E=7.9e-11. | Similar to serine proteinase HtrA; PMID: 9371463 best DB hits: BLAST: pir:D69109; serine proteinase HtrA - Methanobacterium; E=0.014 embl:CAA72164.1; (Y11304) ORF E0 [Rhodobacter capsulatus]; E=0.018 gb:AAF87931.1; AF163841_10 (AF163841) putative serine protease; E=0.041 COG: MTH1813; COG0265 Trypsin-like serine proteases, typically; E=0.001 PFAM: PF00595; PDZ domain (Also known as DHR; E=0.0018. | 0.559 |
| htrA | RB10252 | RB10249 | RB10252 | Similar to serine proteinase HtrA; PMID: 9371463 best DB hits: BLAST: pir:D69109; serine proteinase HtrA - Methanobacterium; E=0.014 embl:CAA72164.1; (Y11304) ORF E0 [Rhodobacter capsulatus]; E=0.018 gb:AAF87931.1; AF163841_10 (AF163841) putative serine protease; E=0.041 COG: MTH1813; COG0265 Trypsin-like serine proteases, typically; E=0.001 PFAM: PF00595; PDZ domain (Also known as DHR; E=0.0018. | Best DB hits: BLAST: embl:CAA51674.1; (X73149) Nourseothricin acetyltransferase; E=0.069 gb:AAD47630.1; AF156670_1 (AF156670) nourseothricin; E=0.069 pir:E69786; ribosomal-protein-alanine N-acetyltransfer homolog ydiD; E=0.081 COG: BS_ydiD; COG0456 Acetyltransferases; E=0.008 PFAM: PF00583; Acetyltransferase (GNAT) family; E=7.9e-11. | 0.559 |