Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RB10380Hypothetical protein. (300 aa)    
Predicted Functional Partners:
trxA
Thioredoxin; PMID: 2137818 PMID: 3280308 best DB hits: BLAST: swissprot:P08058; THIO_RHOSH THIOREDOXIN (TRX) ----- pir:; E=8e-17 swissprot:P43785; THIO_HAEIN THIOREDOXIN (TRX) ----- pir:; E=2e-14 swissprot:P00275; THI1_CORNE THIOREDOXIN C-1 ----- pir: TXFK; E=1e-13 COG: HI0084; COG0526 Thiol-disulfide isomerase and thioredoxins; E=2e-15 XF2174; COG3118 Thioredoxin domain-containing protein; E=2e-10 PA5240; COG0526 Thiol-disulfide isomerase and thioredoxins; E=2e-10 PFAM: PF00085; Thioredoxin; E=1.1e-24.
       0.455
RB10384
Hypothetical protein.
       0.406
Your Current Organism:
Rhodopirellula baltica
NCBI taxonomy Id: 243090
Other names: Pirellula sp. 1, R. baltica SH 1, Rhodopirellula baltica SH 1, Rhodopirellula baltica str. SH 1, Rhodopirellula baltica strain SH 1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.