STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB10385Hypothetical protein. (83 aa)    
Predicted Functional Partners:
RB10384
Hypothetical protein.
       0.693
RB10386
Hypothetical protein-signal peptide and transmembrane prediction; Best DB hits: PFAM: PF01090; Ribosomal protein S19e; E=0.077.
       0.572
RB10388
Serine/threonine protein kinase; Best DB hits: BLAST: ddbj:BAB06223.1; (AP001515) serinethreonine protein kinase; E=4e-28 pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=1e-27 embl:CAA73979.1; (Y13639) protein kinase [Staphylococcus aureus]; E=5e-27 COG: BH2504_1; COG0515 Serine/threonine protein kinases; E=3e-29 PFAM: PF00069; Protein kinase domain; E=4.6e-52.
       0.433
RB10391
Hypothetical protein-transmembrane prediction.
       0.433
Your Current Organism:
Rhodopirellula baltica
NCBI taxonomy Id: 243090
Other names: Pirellula sp. 1, R. baltica SH 1, Rhodopirellula baltica SH 1, Rhodopirellula baltica str. SH 1, Rhodopirellula baltica strain SH 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.