RB10887 protein (Rhodopirellula baltica) - STRING interaction network

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RB10887

Carbamyltransferase BlmD; PMID: 9163424 best DB hits: BLAST: swissprot:P74178; YB78_SYNY3 HYPOTHETICAL 69.1 KD PROTEIN SLL1178; E=1e-175 gb:AAK00162.1; AF222753_17 (AF222753) nodulation protein NolO; E=8e-78 swissprot:P55474; NOLO_RHISN NODULATION PROTEIN NOLNO -----; E=1e-76 COG: sll1178; COG2192 Predicted carbamoyl transferase, NodU family; E=1e-176 PFAM: PF02543; Carbamoyltransferase; E=4.4e-130. (609 aa)

Predicted Functional Partners:

RB10886

0.801

RB10884

0.797

RB10890

0.773

RB6730

0.697

RB13317

0.668

argF

0.668

RB2086

0.658

pyrC-2

0.628

pyrB

0.622

pyrB-2

0.622

Your Current Organism:

Rhodopirellula baltica

NCBI taxonomy Id: 243090
Other names: Pirellula sp. 1, R. baltica SH 1, Rhodopirellula baltica SH 1, Rhodopirellula baltica str. SH 1, Rhodopirellula baltica strain SH 1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RB10884	RB10886	RB10884	RB10886	Hypothetical protein-transmembrane prediction.	Hypothetical protein-transmembrane region and signal peptide prediction.	0.808
RB10884	RB10887	RB10884	RB10887	Hypothetical protein-transmembrane prediction.	Carbamyltransferase BlmD; PMID: 9163424 best DB hits: BLAST: swissprot:P74178; YB78_SYNY3 HYPOTHETICAL 69.1 KD PROTEIN SLL1178; E=1e-175 gb:AAK00162.1; AF222753_17 (AF222753) nodulation protein NolO; E=8e-78 swissprot:P55474; NOLO_RHISN NODULATION PROTEIN NOLNO -----; E=1e-76 COG: sll1178; COG2192 Predicted carbamoyl transferase, NodU family; E=1e-176 PFAM: PF02543; Carbamoyltransferase; E=4.4e-130.	0.797
RB10884	RB10890	RB10884	RB10890	Hypothetical protein-transmembrane prediction.	Hypothetical protein-transmembrane prediction.	0.767
RB10886	RB10884	RB10886	RB10884	Hypothetical protein-transmembrane region and signal peptide prediction.	Hypothetical protein-transmembrane prediction.	0.808
RB10886	RB10887	RB10886	RB10887	Hypothetical protein-transmembrane region and signal peptide prediction.	Carbamyltransferase BlmD; PMID: 9163424 best DB hits: BLAST: swissprot:P74178; YB78_SYNY3 HYPOTHETICAL 69.1 KD PROTEIN SLL1178; E=1e-175 gb:AAK00162.1; AF222753_17 (AF222753) nodulation protein NolO; E=8e-78 swissprot:P55474; NOLO_RHISN NODULATION PROTEIN NOLNO -----; E=1e-76 COG: sll1178; COG2192 Predicted carbamoyl transferase, NodU family; E=1e-176 PFAM: PF02543; Carbamoyltransferase; E=4.4e-130.	0.801
RB10886	RB10890	RB10886	RB10890	Hypothetical protein-transmembrane region and signal peptide prediction.	Hypothetical protein-transmembrane prediction.	0.767
RB10887	RB10884	RB10887	RB10884	Carbamyltransferase BlmD; PMID: 9163424 best DB hits: BLAST: swissprot:P74178; YB78_SYNY3 HYPOTHETICAL 69.1 KD PROTEIN SLL1178; E=1e-175 gb:AAK00162.1; AF222753_17 (AF222753) nodulation protein NolO; E=8e-78 swissprot:P55474; NOLO_RHISN NODULATION PROTEIN NOLNO -----; E=1e-76 COG: sll1178; COG2192 Predicted carbamoyl transferase, NodU family; E=1e-176 PFAM: PF02543; Carbamoyltransferase; E=4.4e-130.	Hypothetical protein-transmembrane prediction.	0.797
RB10887	RB10886	RB10887	RB10886	Carbamyltransferase BlmD; PMID: 9163424 best DB hits: BLAST: swissprot:P74178; YB78_SYNY3 HYPOTHETICAL 69.1 KD PROTEIN SLL1178; E=1e-175 gb:AAK00162.1; AF222753_17 (AF222753) nodulation protein NolO; E=8e-78 swissprot:P55474; NOLO_RHISN NODULATION PROTEIN NOLNO -----; E=1e-76 COG: sll1178; COG2192 Predicted carbamoyl transferase, NodU family; E=1e-176 PFAM: PF02543; Carbamoyltransferase; E=4.4e-130.	Hypothetical protein-transmembrane region and signal peptide prediction.	0.801
RB10887	RB10890	RB10887	RB10890	Carbamyltransferase BlmD; PMID: 9163424 best DB hits: BLAST: swissprot:P74178; YB78_SYNY3 HYPOTHETICAL 69.1 KD PROTEIN SLL1178; E=1e-175 gb:AAK00162.1; AF222753_17 (AF222753) nodulation protein NolO; E=8e-78 swissprot:P55474; NOLO_RHISN NODULATION PROTEIN NOLNO -----; E=1e-76 COG: sll1178; COG2192 Predicted carbamoyl transferase, NodU family; E=1e-176 PFAM: PF02543; Carbamoyltransferase; E=4.4e-130.	Hypothetical protein-transmembrane prediction.	0.773
RB10887	RB13317	RB10887	RB13317	Carbamyltransferase BlmD; PMID: 9163424 best DB hits: BLAST: swissprot:P74178; YB78_SYNY3 HYPOTHETICAL 69.1 KD PROTEIN SLL1178; E=1e-175 gb:AAK00162.1; AF222753_17 (AF222753) nodulation protein NolO; E=8e-78 swissprot:P55474; NOLO_RHISN NODULATION PROTEIN NOLNO -----; E=1e-76 COG: sll1178; COG2192 Predicted carbamoyl transferase, NodU family; E=1e-176 PFAM: PF02543; Carbamoyltransferase; E=4.4e-130.	Hypothetical protein-transmembrane prediction; Best DB hits: BLAST: pir:S76130; hypothetical protein - Synechocystis sp. (strain PCC; E=0.002 PFAM: PF00981; Rotavirus RNA-binding Protein 53 (N; E=0.37.	0.668
RB10887	RB2086	RB10887	RB2086	Carbamyltransferase BlmD; PMID: 9163424 best DB hits: BLAST: swissprot:P74178; YB78_SYNY3 HYPOTHETICAL 69.1 KD PROTEIN SLL1178; E=1e-175 gb:AAK00162.1; AF222753_17 (AF222753) nodulation protein NolO; E=8e-78 swissprot:P55474; NOLO_RHISN NODULATION PROTEIN NOLNO -----; E=1e-76 COG: sll1178; COG2192 Predicted carbamoyl transferase, NodU family; E=1e-176 PFAM: PF02543; Carbamoyltransferase; E=4.4e-130.	Similar to O-GlcNAc transferase; PMID: 10617197 best DB hits: BLAST: gb:AAC25927.2; (AC004681) putative O-GlcNAc transferase; E=1e-05 gb:AAB71463.1; (AC000098) Contains similarity to Rattus O-GlcNAc; E=3e-05 pir:T02544; hypothetical protein T26B15.1 - Arabidopsis thaliana; E=8e-05 COG: BH1262; COG0457 TPR-repeat-containing proteins; E=3e-04 PFAM: PF00515; TPR Domain; E=0.06.	0.658
RB10887	RB6730	RB10887	RB6730	Carbamyltransferase BlmD; PMID: 9163424 best DB hits: BLAST: swissprot:P74178; YB78_SYNY3 HYPOTHETICAL 69.1 KD PROTEIN SLL1178; E=1e-175 gb:AAK00162.1; AF222753_17 (AF222753) nodulation protein NolO; E=8e-78 swissprot:P55474; NOLO_RHISN NODULATION PROTEIN NOLNO -----; E=1e-76 COG: sll1178; COG2192 Predicted carbamoyl transferase, NodU family; E=1e-176 PFAM: PF02543; Carbamoyltransferase; E=4.4e-130.	Hypothetical protein.	0.697
RB10887	argF	RB10887	RB5986	Carbamyltransferase BlmD; PMID: 9163424 best DB hits: BLAST: swissprot:P74178; YB78_SYNY3 HYPOTHETICAL 69.1 KD PROTEIN SLL1178; E=1e-175 gb:AAK00162.1; AF222753_17 (AF222753) nodulation protein NolO; E=8e-78 swissprot:P55474; NOLO_RHISN NODULATION PROTEIN NOLNO -----; E=1e-76 COG: sll1178; COG2192 Predicted carbamoyl transferase, NodU family; E=1e-176 PFAM: PF02543; Carbamoyltransferase; E=4.4e-130.	Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.	0.668
RB10887	pyrB	RB10887	RB13301	Carbamyltransferase BlmD; PMID: 9163424 best DB hits: BLAST: swissprot:P74178; YB78_SYNY3 HYPOTHETICAL 69.1 KD PROTEIN SLL1178; E=1e-175 gb:AAK00162.1; AF222753_17 (AF222753) nodulation protein NolO; E=8e-78 swissprot:P55474; NOLO_RHISN NODULATION PROTEIN NOLNO -----; E=1e-76 COG: sll1178; COG2192 Predicted carbamoyl transferase, NodU family; E=1e-176 PFAM: PF02543; Carbamoyltransferase; E=4.4e-130.	Aspartate carbamoyltransferase, catalytic subunit (pyrB); PMID: 6364131 PMID: 6302686 PMID: 6341995 PMID: 10318893 PMID: 2271529 best DB hits: BLAST: gb:AAB91125.1; (AE001099) aspartate carbamoyltransferase,; E=3e-31 swissprot:P96174; PYRB_VIBS2 ASPARTATE CARBAMOYLTRANSFERASE; E=7e-30 embl:CAC11715.1; (AL445064) probable aspartate; E=2e-29 COG: AF0106; COG0540 Aspartate carbamoyltransferase, catalytic chain; E=2e-32 AF1255; COG0078 Ornithine carbamoyltransferase; E=2e-10 PFAM: PF02729; Aspartate/ornithine carbamoyltransfe; E=3.6e-20 PF00185; Aspartate/ornithine carbamoyltransfe; E=3e-0 [...]	0.622
RB10887	pyrB-2	RB10887	RB7429	Carbamyltransferase BlmD; PMID: 9163424 best DB hits: BLAST: swissprot:P74178; YB78_SYNY3 HYPOTHETICAL 69.1 KD PROTEIN SLL1178; E=1e-175 gb:AAK00162.1; AF222753_17 (AF222753) nodulation protein NolO; E=8e-78 swissprot:P55474; NOLO_RHISN NODULATION PROTEIN NOLNO -----; E=1e-76 COG: sll1178; COG2192 Predicted carbamoyl transferase, NodU family; E=1e-176 PFAM: PF02543; Carbamoyltransferase; E=4.4e-130.	Aspartate carbamoyltransferase; PMID: 97000351 best DB hits: BLAST: embl:CAB93367.1; (AL357523) aspartate carbamoyltransferase; E=4e-67 swissprot:P74163; PYRB_SYNY3 ASPARTATE CARBAMOYLTRANSFERASE; E=6e-64 swissprot:Q59711; PYRB_PSEPU ASPARTATE CARBAMOYLTRANSFERASE; E=5e-63 COG: slr1476; COG0540 Aspartate carbamoyltransferase, catalytic chain; E=6e-65 PFAM: PF02729; Aspartate/ornithine carbamoylt; E=1.1e-44 PF01229; Glycosyl hydrolases family 39; E=0.23 PF00185; Aspartate/ornithine carbamoylt; E=7.1e-18; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.	0.622
RB10887	pyrC-2	RB10887	RB7430	Carbamyltransferase BlmD; PMID: 9163424 best DB hits: BLAST: swissprot:P74178; YB78_SYNY3 HYPOTHETICAL 69.1 KD PROTEIN SLL1178; E=1e-175 gb:AAK00162.1; AF222753_17 (AF222753) nodulation protein NolO; E=8e-78 swissprot:P55474; NOLO_RHISN NODULATION PROTEIN NOLNO -----; E=1e-76 COG: sll1178; COG2192 Predicted carbamoyl transferase, NodU family; E=1e-176 PFAM: PF02543; Carbamoyltransferase; E=4.4e-130.	Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.	0.628
RB10890	RB10884	RB10890	RB10884	Hypothetical protein-transmembrane prediction.	Hypothetical protein-transmembrane prediction.	0.767
RB10890	RB10886	RB10890	RB10886	Hypothetical protein-transmembrane prediction.	Hypothetical protein-transmembrane region and signal peptide prediction.	0.767
RB10890	RB10887	RB10890	RB10887	Hypothetical protein-transmembrane prediction.	Carbamyltransferase BlmD; PMID: 9163424 best DB hits: BLAST: swissprot:P74178; YB78_SYNY3 HYPOTHETICAL 69.1 KD PROTEIN SLL1178; E=1e-175 gb:AAK00162.1; AF222753_17 (AF222753) nodulation protein NolO; E=8e-78 swissprot:P55474; NOLO_RHISN NODULATION PROTEIN NOLNO -----; E=1e-76 COG: sll1178; COG2192 Predicted carbamoyl transferase, NodU family; E=1e-176 PFAM: PF02543; Carbamoyltransferase; E=4.4e-130.	0.773
RB13317	RB10887	RB13317	RB10887	Hypothetical protein-transmembrane prediction; Best DB hits: BLAST: pir:S76130; hypothetical protein - Synechocystis sp. (strain PCC; E=0.002 PFAM: PF00981; Rotavirus RNA-binding Protein 53 (N; E=0.37.	Carbamyltransferase BlmD; PMID: 9163424 best DB hits: BLAST: swissprot:P74178; YB78_SYNY3 HYPOTHETICAL 69.1 KD PROTEIN SLL1178; E=1e-175 gb:AAK00162.1; AF222753_17 (AF222753) nodulation protein NolO; E=8e-78 swissprot:P55474; NOLO_RHISN NODULATION PROTEIN NOLNO -----; E=1e-76 COG: sll1178; COG2192 Predicted carbamoyl transferase, NodU family; E=1e-176 PFAM: PF02543; Carbamoyltransferase; E=4.4e-130.	0.668

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