RB11216 protein (Rhodopirellula baltica) - STRING interaction network

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RB11216

Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (84 aa)

Predicted Functional Partners:

narB

0.831

gltD

0.817

korA

0.682

yjhQ

0.485

sdhA

0.478

RB7773

0.478

RB12666

0.446

Your Current Organism:

Rhodopirellula baltica

NCBI taxonomy Id: 243090
Other names: Pirellula sp. 1, R. baltica SH 1, Rhodopirellula baltica SH 1, Rhodopirellula baltica str. SH 1, Rhodopirellula baltica strain SH 1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RB11216	RB12666	RB11216	RB12666	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	Best DB hits: BLAST: gb:AAB91057.1; (AE001094) molybdopterin oxidoreductase, iron-sulfur; E=5e-29 gb:AAG19285.1; (AE005024) molybdopterin oxidoreductase; HmoA; E=3e-26 gb:AAB90738.1; (AE001069) molybdopterin oxidoreductase, iron-sulfur; E=1e-24 COG: AF0175; COG0437 Fe-S-cluster-containing hydrogenase components 1; E=5e-30 PFAM: PF01568; Molydopterin dinucleotide bin; E=0.018 PF00037; 4Fe-4S binding domain; E=0.15.	0.446
RB11216	RB7773	RB11216	RB7773	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	Similar to NADH-dependant oxidoreductases; PMID: 97000351 best DB hits: BLAST: embl:CAB62685.1; (AL133422) putative membrane protein; E=6e-12 pir:A49911; NADH oxidase (hydrogen peroxide-forming) (EC 1.6.-.-) -; E=0.008 swissprot:P26829; DHNA_BACSP NADH DEHYDROGENASE (ALKYL; E=0.024 PFAM: PF01134; Glucose inhibited division prote; E=1.1e-05 PF00070; Pyridine nucleotide-disulphide o; E=1.1e-05 PF02032; Phytoene dehydrogenase related e; E=0.43.	0.478
RB11216	gltD	RB11216	RB5653	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	NADH-glutamate synthase small chain; PMID: 2643092 PMID: 3326786 best DB hits: BLAST: ddbj:BAA12742.1; (D85230) small subunit of NADH-dependent; E=1e-163 pir:T49818; probable glutamate synthase (NADPH) [imported] -; E=1e-162 pir:S74625; NADH-glutamate synthase small chain gltD - Synechocystis; E=1e-161 COG: sll1027; COG0493 NADPH-dependent glutamate synthase beta chain and; E=1e-162 PFAM: PF01494; FAD binding domain; E=0.013 PF02254; KTN NAD-binding domain; E=0.036 PF00984; UDP-glucose/GDP-mannose dehydr; E=0.28.	0.817
RB11216	korA	RB11216	RB6935	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	2-oxoglutarate ferredoxin oxidoreductase alpha subunit; PMID: 11401501 best DB hits: BLAST: embl:CAC08296.1; (AL392148) putative oxidoreductase [Streptomyces; E=1e-165 embl:CAB60189.1; (AL132824) putative oxidoreductase alpha-subunit; E=1e-164 pir:F70864; probable oxidoreductase alpha subunit - Mycobacterium; E=1e-160 COG: Rv2455c_2; COG0674 Pyruvate:ferredoxin oxidoreductase and related; E=1e-106 Rv2455c_1; COG1014 Pyruvate:ferredoxin oxidoreductase and related; E=2e-46 BH2374_2; COG0674 Pyruvate:ferredoxin oxidoreductase and related; E=2e-40 PFAM: PF01855; Pyruvate flavodoxin/ferredo [...]	0.682
RB11216	narB	RB11216	RB378	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	Nitrate reductase catalytic subunit; PMID: 7868621 best DB hits: BLAST: ddbj:BAA74791.1; (AB017192) nitrate reductase catalytic subunit; E=1e-156 gb:AAB40292.1; (L49163) narB [Nostoc sp. PCC 7120]; E=1e-105 swissprot:P73448; NARB_SYNY3 NITRATE REDUCTASE ----- pir:; E=1e-105 COG: sll1454; COG0243 Anaerobic dehydrogenases, typically; E=1e-106 MTH1552; COG3383 Uncharacterized anaerobic dehydrogenase; E=5e-74 aq_217; COG0243 Anaerobic dehydrogenases, typically; E=4e-69 PFAM: PF00384; Molybdopterin oxidoreductases; E=1.2e-89 PF01568; Molydopterin dinucleotide bin; E=5.9e-29; Belongs to the [...]	0.831
RB11216	sdhA	RB11216	RB10554	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	Succinate dehydrogenase subunit A; PMID: 98404057 best DB hits: BLAST: embl:CAA69872.1; (Y08563) succinate dehydrogenase subunit A; E=1e-175 ddbj:BAB06811.1; (AP001517) succinate dehydrogenase flavoprotein; E=1e-171 pir:A27763; succinate dehydrogenase (EC 1.3.99.1) flavoprotein -; E=1e-168 COG: BH3092; COG1053 Succinate dehydrogenase/fumarate reductase,; E=1e-172 PFAM: PF01494; FAD binding domain; E=0.0041 PF02032; Phytoene dehydrogenase related; E=0.46 PF00070; Pyridine nucleotide-disulphide; E=0.019.	0.478
RB11216	yjhQ	RB11216	RB11211	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	Hypothetical acetyltransferase yjhQ; PMID: 9175471 PMID: 9727486 best DB hits: BLAST: gb:AAK04154.1; AE006244_3 (AE006244) HYPOTHETICAL PROTEIN; E=2e-12 pir:B82297; probable acetyltransferase VC0655 [imported] - Vibrio; E=7e-12 pir:H83557; hypothetical protein PA0711 [imported] - Pseudomonas; E=2e-11 COG: VC0655; COG3153 Predicted acetyltransferase; E=7e-13 PFAM: PF00583; Acetyltransferase (GNAT) family; E=1.1e-16.	0.485
RB12666	RB11216	RB12666	RB11216	Best DB hits: BLAST: gb:AAB91057.1; (AE001094) molybdopterin oxidoreductase, iron-sulfur; E=5e-29 gb:AAG19285.1; (AE005024) molybdopterin oxidoreductase; HmoA; E=3e-26 gb:AAB90738.1; (AE001069) molybdopterin oxidoreductase, iron-sulfur; E=1e-24 COG: AF0175; COG0437 Fe-S-cluster-containing hydrogenase components 1; E=5e-30 PFAM: PF01568; Molydopterin dinucleotide bin; E=0.018 PF00037; 4Fe-4S binding domain; E=0.15.	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	0.446
RB12666	RB7773	RB12666	RB7773	Best DB hits: BLAST: gb:AAB91057.1; (AE001094) molybdopterin oxidoreductase, iron-sulfur; E=5e-29 gb:AAG19285.1; (AE005024) molybdopterin oxidoreductase; HmoA; E=3e-26 gb:AAB90738.1; (AE001069) molybdopterin oxidoreductase, iron-sulfur; E=1e-24 COG: AF0175; COG0437 Fe-S-cluster-containing hydrogenase components 1; E=5e-30 PFAM: PF01568; Molydopterin dinucleotide bin; E=0.018 PF00037; 4Fe-4S binding domain; E=0.15.	Similar to NADH-dependant oxidoreductases; PMID: 97000351 best DB hits: BLAST: embl:CAB62685.1; (AL133422) putative membrane protein; E=6e-12 pir:A49911; NADH oxidase (hydrogen peroxide-forming) (EC 1.6.-.-) -; E=0.008 swissprot:P26829; DHNA_BACSP NADH DEHYDROGENASE (ALKYL; E=0.024 PFAM: PF01134; Glucose inhibited division prote; E=1.1e-05 PF00070; Pyridine nucleotide-disulphide o; E=1.1e-05 PF02032; Phytoene dehydrogenase related e; E=0.43.	0.430
RB12666	gltD	RB12666	RB5653	Best DB hits: BLAST: gb:AAB91057.1; (AE001094) molybdopterin oxidoreductase, iron-sulfur; E=5e-29 gb:AAG19285.1; (AE005024) molybdopterin oxidoreductase; HmoA; E=3e-26 gb:AAB90738.1; (AE001069) molybdopterin oxidoreductase, iron-sulfur; E=1e-24 COG: AF0175; COG0437 Fe-S-cluster-containing hydrogenase components 1; E=5e-30 PFAM: PF01568; Molydopterin dinucleotide bin; E=0.018 PF00037; 4Fe-4S binding domain; E=0.15.	NADH-glutamate synthase small chain; PMID: 2643092 PMID: 3326786 best DB hits: BLAST: ddbj:BAA12742.1; (D85230) small subunit of NADH-dependent; E=1e-163 pir:T49818; probable glutamate synthase (NADPH) [imported] -; E=1e-162 pir:S74625; NADH-glutamate synthase small chain gltD - Synechocystis; E=1e-161 COG: sll1027; COG0493 NADPH-dependent glutamate synthase beta chain and; E=1e-162 PFAM: PF01494; FAD binding domain; E=0.013 PF02254; KTN NAD-binding domain; E=0.036 PF00984; UDP-glucose/GDP-mannose dehydr; E=0.28.	0.462
RB12666	korA	RB12666	RB6935	Best DB hits: BLAST: gb:AAB91057.1; (AE001094) molybdopterin oxidoreductase, iron-sulfur; E=5e-29 gb:AAG19285.1; (AE005024) molybdopterin oxidoreductase; HmoA; E=3e-26 gb:AAB90738.1; (AE001069) molybdopterin oxidoreductase, iron-sulfur; E=1e-24 COG: AF0175; COG0437 Fe-S-cluster-containing hydrogenase components 1; E=5e-30 PFAM: PF01568; Molydopterin dinucleotide bin; E=0.018 PF00037; 4Fe-4S binding domain; E=0.15.	2-oxoglutarate ferredoxin oxidoreductase alpha subunit; PMID: 11401501 best DB hits: BLAST: embl:CAC08296.1; (AL392148) putative oxidoreductase [Streptomyces; E=1e-165 embl:CAB60189.1; (AL132824) putative oxidoreductase alpha-subunit; E=1e-164 pir:F70864; probable oxidoreductase alpha subunit - Mycobacterium; E=1e-160 COG: Rv2455c_2; COG0674 Pyruvate:ferredoxin oxidoreductase and related; E=1e-106 Rv2455c_1; COG1014 Pyruvate:ferredoxin oxidoreductase and related; E=2e-46 BH2374_2; COG0674 Pyruvate:ferredoxin oxidoreductase and related; E=2e-40 PFAM: PF01855; Pyruvate flavodoxin/ferredo [...]	0.474
RB12666	narB	RB12666	RB378	Best DB hits: BLAST: gb:AAB91057.1; (AE001094) molybdopterin oxidoreductase, iron-sulfur; E=5e-29 gb:AAG19285.1; (AE005024) molybdopterin oxidoreductase; HmoA; E=3e-26 gb:AAB90738.1; (AE001069) molybdopterin oxidoreductase, iron-sulfur; E=1e-24 COG: AF0175; COG0437 Fe-S-cluster-containing hydrogenase components 1; E=5e-30 PFAM: PF01568; Molydopterin dinucleotide bin; E=0.018 PF00037; 4Fe-4S binding domain; E=0.15.	Nitrate reductase catalytic subunit; PMID: 7868621 best DB hits: BLAST: ddbj:BAA74791.1; (AB017192) nitrate reductase catalytic subunit; E=1e-156 gb:AAB40292.1; (L49163) narB [Nostoc sp. PCC 7120]; E=1e-105 swissprot:P73448; NARB_SYNY3 NITRATE REDUCTASE ----- pir:; E=1e-105 COG: sll1454; COG0243 Anaerobic dehydrogenases, typically; E=1e-106 MTH1552; COG3383 Uncharacterized anaerobic dehydrogenase; E=5e-74 aq_217; COG0243 Anaerobic dehydrogenases, typically; E=4e-69 PFAM: PF00384; Molybdopterin oxidoreductases; E=1.2e-89 PF01568; Molydopterin dinucleotide bin; E=5.9e-29; Belongs to the [...]	0.779
RB12666	sdhA	RB12666	RB10554	Best DB hits: BLAST: gb:AAB91057.1; (AE001094) molybdopterin oxidoreductase, iron-sulfur; E=5e-29 gb:AAG19285.1; (AE005024) molybdopterin oxidoreductase; HmoA; E=3e-26 gb:AAB90738.1; (AE001069) molybdopterin oxidoreductase, iron-sulfur; E=1e-24 COG: AF0175; COG0437 Fe-S-cluster-containing hydrogenase components 1; E=5e-30 PFAM: PF01568; Molydopterin dinucleotide bin; E=0.018 PF00037; 4Fe-4S binding domain; E=0.15.	Succinate dehydrogenase subunit A; PMID: 98404057 best DB hits: BLAST: embl:CAA69872.1; (Y08563) succinate dehydrogenase subunit A; E=1e-175 ddbj:BAB06811.1; (AP001517) succinate dehydrogenase flavoprotein; E=1e-171 pir:A27763; succinate dehydrogenase (EC 1.3.99.1) flavoprotein -; E=1e-168 COG: BH3092; COG1053 Succinate dehydrogenase/fumarate reductase,; E=1e-172 PFAM: PF01494; FAD binding domain; E=0.0041 PF02032; Phytoene dehydrogenase related; E=0.46 PF00070; Pyridine nucleotide-disulphide; E=0.019.	0.430
RB7773	RB11216	RB7773	RB11216	Similar to NADH-dependant oxidoreductases; PMID: 97000351 best DB hits: BLAST: embl:CAB62685.1; (AL133422) putative membrane protein; E=6e-12 pir:A49911; NADH oxidase (hydrogen peroxide-forming) (EC 1.6.-.-) -; E=0.008 swissprot:P26829; DHNA_BACSP NADH DEHYDROGENASE (ALKYL; E=0.024 PFAM: PF01134; Glucose inhibited division prote; E=1.1e-05 PF00070; Pyridine nucleotide-disulphide o; E=1.1e-05 PF02032; Phytoene dehydrogenase related e; E=0.43.	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	0.478
RB7773	RB12666	RB7773	RB12666	Similar to NADH-dependant oxidoreductases; PMID: 97000351 best DB hits: BLAST: embl:CAB62685.1; (AL133422) putative membrane protein; E=6e-12 pir:A49911; NADH oxidase (hydrogen peroxide-forming) (EC 1.6.-.-) -; E=0.008 swissprot:P26829; DHNA_BACSP NADH DEHYDROGENASE (ALKYL; E=0.024 PFAM: PF01134; Glucose inhibited division prote; E=1.1e-05 PF00070; Pyridine nucleotide-disulphide o; E=1.1e-05 PF02032; Phytoene dehydrogenase related e; E=0.43.	Best DB hits: BLAST: gb:AAB91057.1; (AE001094) molybdopterin oxidoreductase, iron-sulfur; E=5e-29 gb:AAG19285.1; (AE005024) molybdopterin oxidoreductase; HmoA; E=3e-26 gb:AAB90738.1; (AE001069) molybdopterin oxidoreductase, iron-sulfur; E=1e-24 COG: AF0175; COG0437 Fe-S-cluster-containing hydrogenase components 1; E=5e-30 PFAM: PF01568; Molydopterin dinucleotide bin; E=0.018 PF00037; 4Fe-4S binding domain; E=0.15.	0.430
RB7773	korA	RB7773	RB6935	Similar to NADH-dependant oxidoreductases; PMID: 97000351 best DB hits: BLAST: embl:CAB62685.1; (AL133422) putative membrane protein; E=6e-12 pir:A49911; NADH oxidase (hydrogen peroxide-forming) (EC 1.6.-.-) -; E=0.008 swissprot:P26829; DHNA_BACSP NADH DEHYDROGENASE (ALKYL; E=0.024 PFAM: PF01134; Glucose inhibited division prote; E=1.1e-05 PF00070; Pyridine nucleotide-disulphide o; E=1.1e-05 PF02032; Phytoene dehydrogenase related e; E=0.43.	2-oxoglutarate ferredoxin oxidoreductase alpha subunit; PMID: 11401501 best DB hits: BLAST: embl:CAC08296.1; (AL392148) putative oxidoreductase [Streptomyces; E=1e-165 embl:CAB60189.1; (AL132824) putative oxidoreductase alpha-subunit; E=1e-164 pir:F70864; probable oxidoreductase alpha subunit - Mycobacterium; E=1e-160 COG: Rv2455c_2; COG0674 Pyruvate:ferredoxin oxidoreductase and related; E=1e-106 Rv2455c_1; COG1014 Pyruvate:ferredoxin oxidoreductase and related; E=2e-46 BH2374_2; COG0674 Pyruvate:ferredoxin oxidoreductase and related; E=2e-40 PFAM: PF01855; Pyruvate flavodoxin/ferredo [...]	0.517
gltD	RB11216	RB5653	RB11216	NADH-glutamate synthase small chain; PMID: 2643092 PMID: 3326786 best DB hits: BLAST: ddbj:BAA12742.1; (D85230) small subunit of NADH-dependent; E=1e-163 pir:T49818; probable glutamate synthase (NADPH) [imported] -; E=1e-162 pir:S74625; NADH-glutamate synthase small chain gltD - Synechocystis; E=1e-161 COG: sll1027; COG0493 NADPH-dependent glutamate synthase beta chain and; E=1e-162 PFAM: PF01494; FAD binding domain; E=0.013 PF02254; KTN NAD-binding domain; E=0.036 PF00984; UDP-glucose/GDP-mannose dehydr; E=0.28.	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	0.817
gltD	RB12666	RB5653	RB12666	NADH-glutamate synthase small chain; PMID: 2643092 PMID: 3326786 best DB hits: BLAST: ddbj:BAA12742.1; (D85230) small subunit of NADH-dependent; E=1e-163 pir:T49818; probable glutamate synthase (NADPH) [imported] -; E=1e-162 pir:S74625; NADH-glutamate synthase small chain gltD - Synechocystis; E=1e-161 COG: sll1027; COG0493 NADPH-dependent glutamate synthase beta chain and; E=1e-162 PFAM: PF01494; FAD binding domain; E=0.013 PF02254; KTN NAD-binding domain; E=0.036 PF00984; UDP-glucose/GDP-mannose dehydr; E=0.28.	Best DB hits: BLAST: gb:AAB91057.1; (AE001094) molybdopterin oxidoreductase, iron-sulfur; E=5e-29 gb:AAG19285.1; (AE005024) molybdopterin oxidoreductase; HmoA; E=3e-26 gb:AAB90738.1; (AE001069) molybdopterin oxidoreductase, iron-sulfur; E=1e-24 COG: AF0175; COG0437 Fe-S-cluster-containing hydrogenase components 1; E=5e-30 PFAM: PF01568; Molydopterin dinucleotide bin; E=0.018 PF00037; 4Fe-4S binding domain; E=0.15.	0.462
gltD	korA	RB5653	RB6935	NADH-glutamate synthase small chain; PMID: 2643092 PMID: 3326786 best DB hits: BLAST: ddbj:BAA12742.1; (D85230) small subunit of NADH-dependent; E=1e-163 pir:T49818; probable glutamate synthase (NADPH) [imported] -; E=1e-162 pir:S74625; NADH-glutamate synthase small chain gltD - Synechocystis; E=1e-161 COG: sll1027; COG0493 NADPH-dependent glutamate synthase beta chain and; E=1e-162 PFAM: PF01494; FAD binding domain; E=0.013 PF02254; KTN NAD-binding domain; E=0.036 PF00984; UDP-glucose/GDP-mannose dehydr; E=0.28.	2-oxoglutarate ferredoxin oxidoreductase alpha subunit; PMID: 11401501 best DB hits: BLAST: embl:CAC08296.1; (AL392148) putative oxidoreductase [Streptomyces; E=1e-165 embl:CAB60189.1; (AL132824) putative oxidoreductase alpha-subunit; E=1e-164 pir:F70864; probable oxidoreductase alpha subunit - Mycobacterium; E=1e-160 COG: Rv2455c_2; COG0674 Pyruvate:ferredoxin oxidoreductase and related; E=1e-106 Rv2455c_1; COG1014 Pyruvate:ferredoxin oxidoreductase and related; E=2e-46 BH2374_2; COG0674 Pyruvate:ferredoxin oxidoreductase and related; E=2e-40 PFAM: PF01855; Pyruvate flavodoxin/ferredo [...]	0.894
gltD	narB	RB5653	RB378	NADH-glutamate synthase small chain; PMID: 2643092 PMID: 3326786 best DB hits: BLAST: ddbj:BAA12742.1; (D85230) small subunit of NADH-dependent; E=1e-163 pir:T49818; probable glutamate synthase (NADPH) [imported] -; E=1e-162 pir:S74625; NADH-glutamate synthase small chain gltD - Synechocystis; E=1e-161 COG: sll1027; COG0493 NADPH-dependent glutamate synthase beta chain and; E=1e-162 PFAM: PF01494; FAD binding domain; E=0.013 PF02254; KTN NAD-binding domain; E=0.036 PF00984; UDP-glucose/GDP-mannose dehydr; E=0.28.	Nitrate reductase catalytic subunit; PMID: 7868621 best DB hits: BLAST: ddbj:BAA74791.1; (AB017192) nitrate reductase catalytic subunit; E=1e-156 gb:AAB40292.1; (L49163) narB [Nostoc sp. PCC 7120]; E=1e-105 swissprot:P73448; NARB_SYNY3 NITRATE REDUCTASE ----- pir:; E=1e-105 COG: sll1454; COG0243 Anaerobic dehydrogenases, typically; E=1e-106 MTH1552; COG3383 Uncharacterized anaerobic dehydrogenase; E=5e-74 aq_217; COG0243 Anaerobic dehydrogenases, typically; E=4e-69 PFAM: PF00384; Molybdopterin oxidoreductases; E=1.2e-89 PF01568; Molydopterin dinucleotide bin; E=5.9e-29; Belongs to the [...]	0.932

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