STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB11977Hypothetical protein-putative ATP-binding. (196 aa)    
Predicted Functional Partners:
RB11976
PMID: 10984043 best DB hits: BLAST: pir:B83500; probable two-component response regulator PA1157; E=3e-51 pir:F82213; DNA-binding response regulator VC1320 [imported] -; E=4e-41 pir:C83420; probable two-component response regulator PA1799; E=3e-39 COG: PA1157; COG0745 Response regulators consisting of a CheY-like; E=3e-52 rstA; COG0745 Response regulators consisting of a CheY-like receiver; E=5e-34 BS_yclJ; COG0745 Response regulators consisting of a CheY-like; E=8e-34 PFAM: PF00072; Response regulator receiver doma; E=4e-27 PF00486; Transcriptional regulatory prote; E=2.7e-17.
       0.572
Your Current Organism:
Rhodopirellula baltica
NCBI taxonomy Id: 243090
Other names: Pirellula sp. 1, R. baltica SH 1, Rhodopirellula baltica SH 1, Rhodopirellula baltica str. SH 1, Rhodopirellula baltica strain SH 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.