Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Pph1 | RB12486 | RB8362 | RB12486 | Probable protein phosphatase 1; PMID: 11298281 best DB hits: BLAST: gb:AAF81068.1; AF223364_3 (AF223364) protein phosphatase 1; E=9e-32 pir:E71538; hypothetical protein CT259 - Chlamydia trachomatis; E=4e-28 pir:H75265; conserved hypothetical protein - Deinococcus radiodurans; E=5e-28 COG: CT259; COG0631 Protein serine/threonine phosphatases; E=4e-29 PFAM: PF00481; Protein phosphatase 2C; E=4.9e-09. | Serine/threonine protein kinase; PMID: 7768349 best DB hits: BLAST: pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=4e-44 pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=4e-40 swissprot:P71584; PKNB_MYCTU PUTATIVE SERINETHREONINE-PROTEIN; E=2e-39 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=4e-45 PFAM: PF00069; Protein kinase domain; E=1.7e-55. | 0.802 |
RB12484 | RB12486 | RB12484 | RB12486 | Hypothetical protein-transmembrane prediction; Best DB hits: PFAM: PF00892; Integral membrane protein DUF6; E=0.67. | Serine/threonine protein kinase; PMID: 7768349 best DB hits: BLAST: pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=4e-44 pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=4e-40 swissprot:P71584; PKNB_MYCTU PUTATIVE SERINETHREONINE-PROTEIN; E=2e-39 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=4e-45 PFAM: PF00069; Protein kinase domain; E=1.7e-55. | 0.526 |
RB12486 | Pph1 | RB12486 | RB8362 | Serine/threonine protein kinase; PMID: 7768349 best DB hits: BLAST: pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=4e-44 pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=4e-40 swissprot:P71584; PKNB_MYCTU PUTATIVE SERINETHREONINE-PROTEIN; E=2e-39 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=4e-45 PFAM: PF00069; Protein kinase domain; E=1.7e-55. | Probable protein phosphatase 1; PMID: 11298281 best DB hits: BLAST: gb:AAF81068.1; AF223364_3 (AF223364) protein phosphatase 1; E=9e-32 pir:E71538; hypothetical protein CT259 - Chlamydia trachomatis; E=4e-28 pir:H75265; conserved hypothetical protein - Deinococcus radiodurans; E=5e-28 COG: CT259; COG0631 Protein serine/threonine phosphatases; E=4e-29 PFAM: PF00481; Protein phosphatase 2C; E=4.9e-09. | 0.802 |
RB12486 | RB12484 | RB12486 | RB12484 | Serine/threonine protein kinase; PMID: 7768349 best DB hits: BLAST: pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=4e-44 pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=4e-40 swissprot:P71584; PKNB_MYCTU PUTATIVE SERINETHREONINE-PROTEIN; E=2e-39 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=4e-45 PFAM: PF00069; Protein kinase domain; E=1.7e-55. | Hypothetical protein-transmembrane prediction; Best DB hits: PFAM: PF00892; Integral membrane protein DUF6; E=0.67. | 0.526 |
RB12486 | RB3245 | RB12486 | RB3245 | Serine/threonine protein kinase; PMID: 7768349 best DB hits: BLAST: pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=4e-44 pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=4e-40 swissprot:P71584; PKNB_MYCTU PUTATIVE SERINETHREONINE-PROTEIN; E=2e-39 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=4e-45 PFAM: PF00069; Protein kinase domain; E=1.7e-55. | Protein phosphatase 1; PMID: 11298281 best DB hits: BLAST: gb:AAF81068.1; AF223364_3 (AF223364) protein phosphatase 1; E=3e-27 pir:E71538; hypothetical protein CT259 - Chlamydia trachomatis; E=5e-26 embl:CAA10712.1; (AJ132604) pppL protein [Lactococcus lactis]; E=2e-25 COG: CT259; COG0631 Protein serine/threonine phosphatases; E=4e-27 PFAM: PF00481; Protein phosphatase 2C; E=1.2e-09. | 0.801 |
RB3245 | RB12486 | RB3245 | RB12486 | Protein phosphatase 1; PMID: 11298281 best DB hits: BLAST: gb:AAF81068.1; AF223364_3 (AF223364) protein phosphatase 1; E=3e-27 pir:E71538; hypothetical protein CT259 - Chlamydia trachomatis; E=5e-26 embl:CAA10712.1; (AJ132604) pppL protein [Lactococcus lactis]; E=2e-25 COG: CT259; COG0631 Protein serine/threonine phosphatases; E=4e-27 PFAM: PF00481; Protein phosphatase 2C; E=1.2e-09. | Serine/threonine protein kinase; PMID: 7768349 best DB hits: BLAST: pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=4e-44 pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=4e-40 swissprot:P71584; PKNB_MYCTU PUTATIVE SERINETHREONINE-PROTEIN; E=2e-39 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=4e-45 PFAM: PF00069; Protein kinase domain; E=1.7e-55. | 0.801 |