STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB1277Hypothetical protein-signal peptide and transmembrane prediction. (143 aa)    
Predicted Functional Partners:
RB1275
Hypothetical protein.
       0.569
RB1276
Hypothetical protein.
       0.569
RB1279
Probable peptidyl-prolyl cis-trans isomerase, FkbP-type; Best DB hits: BLAST: gb:AAF35906.1; AF232672_1 (AF232672) FK506-binding protein; E=7e-06 pir:A83180; probable peptidyl-prolyl cis-trans isomerase,; E=3e-04 prf:2204313A; FK506-binding protein 65kD [Mus musculus]; E=9e-04 COG: PA3717; COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1; E=3e-05 PFAM: PF00254; FKBP-type peptidyl-prolyl cis-trans; E=6.8e-10.
       0.506
RB1281
Hypothetical protein; PMID: 10747959.
       0.506
Your Current Organism:
Rhodopirellula baltica
NCBI taxonomy Id: 243090
Other names: Pirellula sp. 1, R. baltica SH 1, Rhodopirellula baltica SH 1, Rhodopirellula baltica str. SH 1, Rhodopirellula baltica strain SH 1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.