STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB12975Hypothetical protein. (69 aa)    
Predicted Functional Partners:
RB12974
Hypothetical protein.
       0.773
RB12978
Hypothetical protein.
       0.773
RB12982
Hypothetical protein.
       0.773
RB12984
Hypothetical protein-transmembrane prediction.
       0.773
RB12989
Hypothetical protein-transmembrane prediction.
       0.773
RB12994
Putative oxidoreductase, Fe-S subunit; Best DB hits: BLAST: gb:AAG56658.1; AE005390_5 (AE005390) putative oxidoreductase, Fe-S; E=2e-16 pir:G64924; nrfC protein homolog b1671 - Escherichia coli -----; E=4e-16 gb:AAG57820.1; AE005499_7 (AE005499) involved in electron; E=3e-15 COG: ydhX; COG0437 Fe-S-cluster-containing hydrogenase components 1; E=4e-17 hydN; COG1142 Fe-S-cluster-containing hydrogenase components 2; E=3e-16 AF0157; COG0437 Fe-S-cluster-containing hydrogenase components 1; E=8e-14 PFAM: PF00027; Cyclic nucleotide-binding domain; E=0.0017 PF00037; 4Fe-4S binding domain; E=0.31.
       0.773
RB12997
Hypothetical protein.
       0.572
Your Current Organism:
Rhodopirellula baltica
NCBI taxonomy Id: 243090
Other names: Pirellula sp. 1, R. baltica SH 1, Rhodopirellula baltica SH 1, Rhodopirellula baltica str. SH 1, Rhodopirellula baltica strain SH 1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.