STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB12982Hypothetical protein. (257 aa)    
Predicted Functional Partners:
RB12994
Putative oxidoreductase, Fe-S subunit; Best DB hits: BLAST: gb:AAG56658.1; AE005390_5 (AE005390) putative oxidoreductase, Fe-S; E=2e-16 pir:G64924; nrfC protein homolog b1671 - Escherichia coli -----; E=4e-16 gb:AAG57820.1; AE005499_7 (AE005499) involved in electron; E=3e-15 COG: ydhX; COG0437 Fe-S-cluster-containing hydrogenase components 1; E=4e-17 hydN; COG1142 Fe-S-cluster-containing hydrogenase components 2; E=3e-16 AF0157; COG0437 Fe-S-cluster-containing hydrogenase components 1; E=8e-14 PFAM: PF00027; Cyclic nucleotide-binding domain; E=0.0017 PF00037; 4Fe-4S binding domain; E=0.31.
       0.806
RB12974
Hypothetical protein.
       0.773
RB12975
Hypothetical protein.
       0.773
RB12978
Hypothetical protein.
       0.773
RB12984
Hypothetical protein-transmembrane prediction.
       0.773
RB12989
Hypothetical protein-transmembrane prediction.
       0.773
moaE
Molybdopterin converting factor, large subunit; PMID: 8361352 PMID: 8514782 best DB hits: BLAST: gb:AAF67478.1; AF155659_1 (AF155659) molybdenum cofactor; E=6e-15 embl:CAB71291.1; (AJ271728) molybdopterin synthase, large subunit; E=1e-14 pir:D70487; molybdopterin biosynthesis protein E chain [similarity]; E=1e-13 COG: aq_2181; COG0314 Molybdopterin converting factor, large subunit; E=1e-14 PFAM: PF02391; Molydopterin converting factor subun; E=7.2e-26.
  
 
 0.765
MoaC
Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
  
  
 0.749
moeA
Molybdopterin biosynthesis protein MoeA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
  
 
 0.735
mobA
Molybdopterin-guanine dinucleotide biosynthesis protein MobA; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.
  
 
 0.695
Your Current Organism:
Rhodopirellula baltica
NCBI taxonomy Id: 243090
Other names: Pirellula sp. 1, R. baltica SH 1, Rhodopirellula baltica SH 1, Rhodopirellula baltica str. SH 1, Rhodopirellula baltica strain SH 1
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