STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB13017Hypothetical protein-signal peptide and transmembrane prediction. (130 aa)    
Predicted Functional Partners:
RB13016
Hypothetical protein.
       0.570
RB13015
Hypothetical protein.
       0.503
RB13021
Conserved hypothetical protein-putative receptor protein kinase; PMID: 10731132 best DB hits: BLAST: gb:AAF82144.1; AC034256_8 (AC034256) Contains similarity to F-box; E=2e-07 gb:AAF44956.1; AE003406_161 (AE003416) symbol=BG:DS07108.4; E=1e-04 gb:AAF53475.1; (AE003648) BG:DS07108.4 gene product [Drosophila; E=1e-04.
       0.496
RB13024
Conserved hypothetical protein; PMID: 8905231 best DB hits: BLAST: pir:S76466; hypothetical protein sll1853 - Synechocystis sp. (strain; E=6e-18.
       0.457
Your Current Organism:
Rhodopirellula baltica
NCBI taxonomy Id: 243090
Other names: Pirellula sp. 1, R. baltica SH 1, Rhodopirellula baltica SH 1, Rhodopirellula baltica str. SH 1, Rhodopirellula baltica strain SH 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.