STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atsAArylsulfatase; PMID: 7744061 best DB hits: BLAST: swissprot:P51691; ARS_PSEAE ARYLSULFATASE (ARYL-SULFATE; E=1e-39 pir:S69336; arylsulfatase (EC 3.1.6.1) - Pseudomonas aeruginosa; E=3e-39 embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=2e-35 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=9e-41 PFAM: PF00884; Sulfatase; E=1.3e-43. (538 aa)    
Predicted Functional Partners:
RB1478
Hypothetical protein-transmembrane prediction.
       0.773
arsB-2
Arylsulfatase B [Precursor]; PMID: 1427856 best DB hits: BLAST: swissprot:P33727; ARSB_FELCA ARYLSULFATASE B PRECURSOR (ASB); E=2e-47 pdb:1FSU; 4-Sulfatase (Human); E=3e-47 gb:AAA51779.1; (M32373) arylsulfatase B precursor [Homo sapiens]; E=4e-47 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=2e-31 PFAM: PF00884; Sulfatase; E=3.6e-76.
 
    
0.638
Your Current Organism:
Rhodopirellula baltica
NCBI taxonomy Id: 243090
Other names: Pirellula sp. 1, R. baltica SH 1, Rhodopirellula baltica SH 1, Rhodopirellula baltica str. SH 1, Rhodopirellula baltica strain SH 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.