Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RB1716 | RB1717 | Hypothetical protein. | Hypothetical protein-transmembrane region and signal peptide prediction; PMID: 11214968. | 0.574 |
RB1716 | RB1721 | Hypothetical protein. | Hypothetical protein. | 0.474 |
RB1717 | RB1716 | Hypothetical protein-transmembrane region and signal peptide prediction; PMID: 11214968. | Hypothetical protein. | 0.574 |
RB1717 | RB1721 | Hypothetical protein-transmembrane region and signal peptide prediction; PMID: 11214968. | Hypothetical protein. | 0.628 |
RB1717 | RB1722 | Hypothetical protein-transmembrane region and signal peptide prediction; PMID: 11214968. | PMID: 2402464 best DB hits: BLAST: swissprot:P23701; OM6_CHLPS 60 KDA OUTER MEMBRANE PROTEIN; E=2e-05 pir:B39439; 60K cysteine-rich outer membrane protein 1 precursor -; E=2e-05 pir:JC5204; 60K cysteine-rich outer membrane protein 2 precursor -; E=2e-05. | 0.473 |
RB1721 | RB1716 | Hypothetical protein. | Hypothetical protein. | 0.474 |
RB1721 | RB1717 | Hypothetical protein. | Hypothetical protein-transmembrane region and signal peptide prediction; PMID: 11214968. | 0.628 |
RB1721 | RB1722 | Hypothetical protein. | PMID: 2402464 best DB hits: BLAST: swissprot:P23701; OM6_CHLPS 60 KDA OUTER MEMBRANE PROTEIN; E=2e-05 pir:B39439; 60K cysteine-rich outer membrane protein 1 precursor -; E=2e-05 pir:JC5204; 60K cysteine-rich outer membrane protein 2 precursor -; E=2e-05. | 0.572 |
RB1722 | RB1717 | PMID: 2402464 best DB hits: BLAST: swissprot:P23701; OM6_CHLPS 60 KDA OUTER MEMBRANE PROTEIN; E=2e-05 pir:B39439; 60K cysteine-rich outer membrane protein 1 precursor -; E=2e-05 pir:JC5204; 60K cysteine-rich outer membrane protein 2 precursor -; E=2e-05. | Hypothetical protein-transmembrane region and signal peptide prediction; PMID: 11214968. | 0.473 |
RB1722 | RB1721 | PMID: 2402464 best DB hits: BLAST: swissprot:P23701; OM6_CHLPS 60 KDA OUTER MEMBRANE PROTEIN; E=2e-05 pir:B39439; 60K cysteine-rich outer membrane protein 1 precursor -; E=2e-05 pir:JC5204; 60K cysteine-rich outer membrane protein 2 precursor -; E=2e-05. | Hypothetical protein. | 0.572 |