Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RB4485 | RB4489 | RB4485 | RB4489 | Conserved hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | Hypothetical protein. | 0.541 |
| RB4485 | ntrC-3 | RB4485 | RB4487 | Conserved hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | Nitrogen assimilation regulatory protein; PMID: 7553451 best DB hits: BLAST: swissprot:Q06065; ATOC_ECOLI ACETOACETATE METABOLISM REGULATORY; E=1e-86 swissprot:P45671; NTRC_AZOBR NITROGEN ASSIMILATION REGULATORY; E=4e-84 pir:S42745; nitrogen assimilation regulatory protein ntrC -; E=5e-84 COG: atoC; COG2204 AAA superfamily ATPases with N-terminal receiver; E=1e-87 PFAM: PF00072; Response regulator receiver dom; E=2e-29 PF00004; ATPase family associated with v; E=0.34 PF00158; Sigma-54 interaction domain; E=5.2e-129. | 0.541 |
| RB4489 | RB4485 | RB4489 | RB4485 | Hypothetical protein. | Conserved hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | 0.541 |
| RB4489 | ntrC-3 | RB4489 | RB4487 | Hypothetical protein. | Nitrogen assimilation regulatory protein; PMID: 7553451 best DB hits: BLAST: swissprot:Q06065; ATOC_ECOLI ACETOACETATE METABOLISM REGULATORY; E=1e-86 swissprot:P45671; NTRC_AZOBR NITROGEN ASSIMILATION REGULATORY; E=4e-84 pir:S42745; nitrogen assimilation regulatory protein ntrC -; E=5e-84 COG: atoC; COG2204 AAA superfamily ATPases with N-terminal receiver; E=1e-87 PFAM: PF00072; Response regulator receiver dom; E=2e-29 PF00004; ATPase family associated with v; E=0.34 PF00158; Sigma-54 interaction domain; E=5.2e-129. | 0.773 |
| ntrC-3 | RB4485 | RB4487 | RB4485 | Nitrogen assimilation regulatory protein; PMID: 7553451 best DB hits: BLAST: swissprot:Q06065; ATOC_ECOLI ACETOACETATE METABOLISM REGULATORY; E=1e-86 swissprot:P45671; NTRC_AZOBR NITROGEN ASSIMILATION REGULATORY; E=4e-84 pir:S42745; nitrogen assimilation regulatory protein ntrC -; E=5e-84 COG: atoC; COG2204 AAA superfamily ATPases with N-terminal receiver; E=1e-87 PFAM: PF00072; Response regulator receiver dom; E=2e-29 PF00004; ATPase family associated with v; E=0.34 PF00158; Sigma-54 interaction domain; E=5.2e-129. | Conserved hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | 0.541 |
| ntrC-3 | RB4489 | RB4487 | RB4489 | Nitrogen assimilation regulatory protein; PMID: 7553451 best DB hits: BLAST: swissprot:Q06065; ATOC_ECOLI ACETOACETATE METABOLISM REGULATORY; E=1e-86 swissprot:P45671; NTRC_AZOBR NITROGEN ASSIMILATION REGULATORY; E=4e-84 pir:S42745; nitrogen assimilation regulatory protein ntrC -; E=5e-84 COG: atoC; COG2204 AAA superfamily ATPases with N-terminal receiver; E=1e-87 PFAM: PF00072; Response regulator receiver dom; E=2e-29 PF00004; ATPase family associated with v; E=0.34 PF00158; Sigma-54 interaction domain; E=5.2e-129. | Hypothetical protein. | 0.773 |