Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RB4532 | RB4536 | RB4532 | RB4536 | Similar to MchE protein; PMID: 12065505 best DB hits: BLAST: embl:CAC21493.1; (AJ278866) MchE protein [Escherichia coli]; E=0.37 swissprot:P22519; CVAA_ECOLI COLICIN V SECRETION PROTEIN CVAA; E=0.38 pir:E82263; conserved hypothetical protein VC0913 [imported] -; E=0.76 PFAM: PF02221; E1 family; E=0.88 PF00364; Biotin-requiring enzyme; E=0.0054. | Hypothetical protein. | 0.571 |
| RB4532 | czcA-3 | RB4532 | RB4530 | Similar to MchE protein; PMID: 12065505 best DB hits: BLAST: embl:CAC21493.1; (AJ278866) MchE protein [Escherichia coli]; E=0.37 swissprot:P22519; CVAA_ECOLI COLICIN V SECRETION PROTEIN CVAA; E=0.38 pir:E82263; conserved hypothetical protein VC0913 [imported] -; E=0.76 PFAM: PF02221; E1 family; E=0.88 PF00364; Biotin-requiring enzyme; E=0.0054. | Cation efflux system protein czcA-1; PMID: 8829543 PMID: 2678100 best DB hits: BLAST: gb:AAG54908.1; AE005237_4 (AE005237) putative inner membrane; E=1e-109 swissprot:P38054; YBDE_ECOLI HYPOTHETICAL 114.7 KDA PROTEIN IN; E=1e-109 gb:AAD11749.1; (AF067954) putative inner membrane protoncation; E=1e-109 COG: ybdE; COG0841 Cation/multidrug efflux pump; E=1e-110 PFAM: PF00873; AcrB/AcrD/AcrF family; E=5.1e-154; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.846 |
| RB4536 | RB4532 | RB4536 | RB4532 | Hypothetical protein. | Similar to MchE protein; PMID: 12065505 best DB hits: BLAST: embl:CAC21493.1; (AJ278866) MchE protein [Escherichia coli]; E=0.37 swissprot:P22519; CVAA_ECOLI COLICIN V SECRETION PROTEIN CVAA; E=0.38 pir:E82263; conserved hypothetical protein VC0913 [imported] -; E=0.76 PFAM: PF02221; E1 family; E=0.88 PF00364; Biotin-requiring enzyme; E=0.0054. | 0.571 |
| RB4536 | czcA-3 | RB4536 | RB4530 | Hypothetical protein. | Cation efflux system protein czcA-1; PMID: 8829543 PMID: 2678100 best DB hits: BLAST: gb:AAG54908.1; AE005237_4 (AE005237) putative inner membrane; E=1e-109 swissprot:P38054; YBDE_ECOLI HYPOTHETICAL 114.7 KDA PROTEIN IN; E=1e-109 gb:AAD11749.1; (AF067954) putative inner membrane protoncation; E=1e-109 COG: ybdE; COG0841 Cation/multidrug efflux pump; E=1e-110 PFAM: PF00873; AcrB/AcrD/AcrF family; E=5.1e-154; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.450 |
| czcA-3 | RB4532 | RB4530 | RB4532 | Cation efflux system protein czcA-1; PMID: 8829543 PMID: 2678100 best DB hits: BLAST: gb:AAG54908.1; AE005237_4 (AE005237) putative inner membrane; E=1e-109 swissprot:P38054; YBDE_ECOLI HYPOTHETICAL 114.7 KDA PROTEIN IN; E=1e-109 gb:AAD11749.1; (AF067954) putative inner membrane protoncation; E=1e-109 COG: ybdE; COG0841 Cation/multidrug efflux pump; E=1e-110 PFAM: PF00873; AcrB/AcrD/AcrF family; E=5.1e-154; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Similar to MchE protein; PMID: 12065505 best DB hits: BLAST: embl:CAC21493.1; (AJ278866) MchE protein [Escherichia coli]; E=0.37 swissprot:P22519; CVAA_ECOLI COLICIN V SECRETION PROTEIN CVAA; E=0.38 pir:E82263; conserved hypothetical protein VC0913 [imported] -; E=0.76 PFAM: PF02221; E1 family; E=0.88 PF00364; Biotin-requiring enzyme; E=0.0054. | 0.846 |
| czcA-3 | RB4536 | RB4530 | RB4536 | Cation efflux system protein czcA-1; PMID: 8829543 PMID: 2678100 best DB hits: BLAST: gb:AAG54908.1; AE005237_4 (AE005237) putative inner membrane; E=1e-109 swissprot:P38054; YBDE_ECOLI HYPOTHETICAL 114.7 KDA PROTEIN IN; E=1e-109 gb:AAD11749.1; (AF067954) putative inner membrane protoncation; E=1e-109 COG: ybdE; COG0841 Cation/multidrug efflux pump; E=1e-110 PFAM: PF00873; AcrB/AcrD/AcrF family; E=5.1e-154; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Hypothetical protein. | 0.450 |