Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RB5722 | RB5724 | RB5722 | RB5724 | Conserved hypothetical protein; PMID: 9371463 best DB hits: BLAST: pir:H69043; conserved hypothetical protein MTH1330 -; E=0.19 swissprot:Q50500; YE63_METTH HYPOTHETICAL PROTEIN MTH1463 (ORF11); E=0.30 pir:A55712; hypothetical protein X mtd 5'-region - Methanobacterium; E=0.39. | Hypothetical protein. | 0.531 |
| RB5722 | rph | RB5722 | RB5725 | Conserved hypothetical protein; PMID: 9371463 best DB hits: BLAST: pir:H69043; conserved hypothetical protein MTH1330 -; E=0.19 swissprot:Q50500; YE63_METTH HYPOTHETICAL PROTEIN MTH1463 (ORF11); E=0.30 pir:A55712; hypothetical protein X mtd 5'-region - Methanobacterium; E=0.39. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.406 |
| RB5724 | RB5722 | RB5724 | RB5722 | Hypothetical protein. | Conserved hypothetical protein; PMID: 9371463 best DB hits: BLAST: pir:H69043; conserved hypothetical protein MTH1330 -; E=0.19 swissprot:Q50500; YE63_METTH HYPOTHETICAL PROTEIN MTH1463 (ORF11); E=0.30 pir:A55712; hypothetical protein X mtd 5'-region - Methanobacterium; E=0.39. | 0.531 |
| RB5724 | rph | RB5724 | RB5725 | Hypothetical protein. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.572 |
| rph | RB5722 | RB5725 | RB5722 | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | Conserved hypothetical protein; PMID: 9371463 best DB hits: BLAST: pir:H69043; conserved hypothetical protein MTH1330 -; E=0.19 swissprot:Q50500; YE63_METTH HYPOTHETICAL PROTEIN MTH1463 (ORF11); E=0.30 pir:A55712; hypothetical protein X mtd 5'-region - Methanobacterium; E=0.39. | 0.406 |
| rph | RB5724 | RB5725 | RB5724 | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | Hypothetical protein. | 0.572 |