RB6658 protein (Rhodopirellula baltica) - STRING interaction network

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RB6658

Hypothetical protein-signal peptide and transmembrane prediction. (347 aa)

Predicted Functional Partners:

RB8892

0.975

RB12351

0.910

cycA

0.879

RB2605

0.840

RB24

0.771

RB1756

0.770

RB728

0.770

gdhP

0.765

RB4008

0.763

RB7418

0.738

Your Current Organism:

Rhodopirellula baltica

NCBI taxonomy Id: 243090
Other names: Pirellula sp. 1, R. baltica SH 1, Rhodopirellula baltica SH 1, Rhodopirellula baltica str. SH 1, Rhodopirellula baltica strain SH 1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RB12351	RB6658	RB12351	RB6658	Similar to c-type cytochrome; PMID: 1646017 best DB hits: BLAST: embl:CAA57910.1; (X82563) c-type cytochrome [Synechocystis sp.]; E=0.77 PFAM: PF00034; Cytochrome c; E=5.6e-05.	Hypothetical protein-signal peptide and transmembrane prediction.	0.910
RB1756	RB4008	RB1756	RB4008	Hypothetical protein-transmembrane prediction.	Best DB hits: BLAST: embl:CAB45032.1; (AL078635) putative large multi-functional protein; E=1e-22 pir:T36423; probable large, multifunctional secreted protein -; E=4e-18 PFAM: PF00034; Cytochrome c; E=0.24 PF01436; NHL repeat; E=0.25.	0.770
RB1756	RB6658	RB1756	RB6658	Hypothetical protein-transmembrane prediction.	Hypothetical protein-signal peptide and transmembrane prediction.	0.770
RB1756	RB7418	RB1756	RB7418	Hypothetical protein-transmembrane prediction.	Hypothetical protein-putative transmembrane protein; Best DB hits: PFAM: PF01433; Peptidase family M1; E=0.23 PF01542; Hepatitis C virus core protei; E=0.54 PF00034; Cytochrome c; E=0.002.	0.773
RB1756	RB8892	RB1756	RB8892	Hypothetical protein-transmembrane prediction.	Best DB hits: BLAST: pir:A83363; probable cytochrome c precursor PA2266 [imported] -; E=6e-09 pir:B81167; cytochrome c552 NMB0717 precursor [similarity] - Neisseria; E=7e-09 pir:F83631; cytochrome c oxidase, subunit II PA0105 [imported] -; E=2e-08 COG: PA2266; COG2010 Cytochrome c, mono- and diheme variants; E=6e-10.	0.774
RB1756	cycA	RB1756	RB7973	Hypothetical protein-transmembrane prediction.	Probable cytochrome c precursor; PMID: 97428333 PMID: 2986626 PMID: 9281430 PMID: 11152119 best DB hits: BLAST: pir:A83363; probable cytochrome c precursor PA2266 [imported] -; E=5e-09 pir:E83075; probable cytochrome c PA4571 [imported] - Pseudomonas; E=7e-07 pir:CCTW5T; cytochrome c552 [validated] - Thermus aquaticus; E=9e-07 COG: PA2266; COG2010 Cytochrome c, mono- and diheme variants; E=5e-10 PFAM: PF00034; Cytochrome c; E=0.042.	0.762
RB1756	gdhP	RB1756	RB1988	Hypothetical protein-transmembrane prediction.	Similar to glucose dehydrogenase-B [pyrroloquinoline-quinone] [Precursor]; PMID: 2671663 best DB hits: BLAST: swissprot:P13650; DHGB_ACICA GLUCOSE DEHYDROGENASE-B; E=0.12 pdb:1CRU; B Chain B, Soluble Quinoprotein Glucose Dehydrogenase; E=0.12 pir:C69050; phycocyanin alpha phycocyanobilin lyase CpcE -; E=0.19.	0.769
RB24	RB6658	RB24	RB6658	Best DB hits: BLAST: pir:F75417; L-sorbosone dehydrogenase - Deinococcus radiodurans; E=0.13 embl:CAB94635.1; (AL359215) putative secreted glycosyl hydrolase; E=0.26 PFAM: PF00034; Cytochrome c; E=0.35.	Hypothetical protein-signal peptide and transmembrane prediction.	0.771
RB2605	RB6658	RB2605	RB6658	Similar to azurin precursor; PMID: 2116366 best DB hits: BLAST: pdb:2AZA; A Chain A, Azurin (Oxidized) ----- pdb: 2AZA B Chain; E=0.012 swissprot:P34097; AZUR_PSEPU AZURIN ----- pir: A37338 azurin -; E=0.024 pdb:1NZR; A Chain A, Azurin Mutant With Trp 48 Replaced By Met; E=0.033 COG: PA4922; COG3241 Azurin; E=0.008 PFAM: PF00127; Copper binding proteins, plasto; E=5e-06 PF00034; Cytochrome c; E=0.0036.	Hypothetical protein-signal peptide and transmembrane prediction.	0.840
RB2605	RB8892	RB2605	RB8892	Similar to azurin precursor; PMID: 2116366 best DB hits: BLAST: pdb:2AZA; A Chain A, Azurin (Oxidized) ----- pdb: 2AZA B Chain; E=0.012 swissprot:P34097; AZUR_PSEPU AZURIN ----- pir: A37338 azurin -; E=0.024 pdb:1NZR; A Chain A, Azurin Mutant With Trp 48 Replaced By Met; E=0.033 COG: PA4922; COG3241 Azurin; E=0.008 PFAM: PF00127; Copper binding proteins, plasto; E=5e-06 PF00034; Cytochrome c; E=0.0036.	Best DB hits: BLAST: pir:A83363; probable cytochrome c precursor PA2266 [imported] -; E=6e-09 pir:B81167; cytochrome c552 NMB0717 precursor [similarity] - Neisseria; E=7e-09 pir:F83631; cytochrome c oxidase, subunit II PA0105 [imported] -; E=2e-08 COG: PA2266; COG2010 Cytochrome c, mono- and diheme variants; E=6e-10.	0.419
RB4008	RB1756	RB4008	RB1756	Best DB hits: BLAST: embl:CAB45032.1; (AL078635) putative large multi-functional protein; E=1e-22 pir:T36423; probable large, multifunctional secreted protein -; E=4e-18 PFAM: PF00034; Cytochrome c; E=0.24 PF01436; NHL repeat; E=0.25.	Hypothetical protein-transmembrane prediction.	0.770
RB4008	RB6658	RB4008	RB6658	Best DB hits: BLAST: embl:CAB45032.1; (AL078635) putative large multi-functional protein; E=1e-22 pir:T36423; probable large, multifunctional secreted protein -; E=4e-18 PFAM: PF00034; Cytochrome c; E=0.24 PF01436; NHL repeat; E=0.25.	Hypothetical protein-signal peptide and transmembrane prediction.	0.763
RB6658	RB12351	RB6658	RB12351	Hypothetical protein-signal peptide and transmembrane prediction.	Similar to c-type cytochrome; PMID: 1646017 best DB hits: BLAST: embl:CAA57910.1; (X82563) c-type cytochrome [Synechocystis sp.]; E=0.77 PFAM: PF00034; Cytochrome c; E=5.6e-05.	0.910
RB6658	RB1756	RB6658	RB1756	Hypothetical protein-signal peptide and transmembrane prediction.	Hypothetical protein-transmembrane prediction.	0.770
RB6658	RB24	RB6658	RB24	Hypothetical protein-signal peptide and transmembrane prediction.	Best DB hits: BLAST: pir:F75417; L-sorbosone dehydrogenase - Deinococcus radiodurans; E=0.13 embl:CAB94635.1; (AL359215) putative secreted glycosyl hydrolase; E=0.26 PFAM: PF00034; Cytochrome c; E=0.35.	0.771
RB6658	RB2605	RB6658	RB2605	Hypothetical protein-signal peptide and transmembrane prediction.	Similar to azurin precursor; PMID: 2116366 best DB hits: BLAST: pdb:2AZA; A Chain A, Azurin (Oxidized) ----- pdb: 2AZA B Chain; E=0.012 swissprot:P34097; AZUR_PSEPU AZURIN ----- pir: A37338 azurin -; E=0.024 pdb:1NZR; A Chain A, Azurin Mutant With Trp 48 Replaced By Met; E=0.033 COG: PA4922; COG3241 Azurin; E=0.008 PFAM: PF00127; Copper binding proteins, plasto; E=5e-06 PF00034; Cytochrome c; E=0.0036.	0.840
RB6658	RB4008	RB6658	RB4008	Hypothetical protein-signal peptide and transmembrane prediction.	Best DB hits: BLAST: embl:CAB45032.1; (AL078635) putative large multi-functional protein; E=1e-22 pir:T36423; probable large, multifunctional secreted protein -; E=4e-18 PFAM: PF00034; Cytochrome c; E=0.24 PF01436; NHL repeat; E=0.25.	0.763
RB6658	RB728	RB6658	RB728	Hypothetical protein-signal peptide and transmembrane prediction.	Conserved hypothetical protein-putative cytochrome c; PMID: 1646017 best DB hits: BLAST: pir:T36406; hypothetical protein SCF34.07 - Streptomyces coelicolor; E=2e-05 pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=0.010 PFAM: PF00034; Cytochrome c; E=0.00011.	0.770
RB6658	RB7418	RB6658	RB7418	Hypothetical protein-signal peptide and transmembrane prediction.	Hypothetical protein-putative transmembrane protein; Best DB hits: PFAM: PF01433; Peptidase family M1; E=0.23 PF01542; Hepatitis C virus core protei; E=0.54 PF00034; Cytochrome c; E=0.002.	0.738
RB6658	RB8892	RB6658	RB8892	Hypothetical protein-signal peptide and transmembrane prediction.	Best DB hits: BLAST: pir:A83363; probable cytochrome c precursor PA2266 [imported] -; E=6e-09 pir:B81167; cytochrome c552 NMB0717 precursor [similarity] - Neisseria; E=7e-09 pir:F83631; cytochrome c oxidase, subunit II PA0105 [imported] -; E=2e-08 COG: PA2266; COG2010 Cytochrome c, mono- and diheme variants; E=6e-10.	0.975

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