STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB6848Hypothetical protein. (75 aa)    
Predicted Functional Partners:
RB6847
Hypothetical protein-transmembrane prediction; PMID: 11842247.
       0.505
RB6845
PMID: 10464185 best DB hits: BLAST: gb:AAC33460.2; (AF067140) exopolysaccharide polymerization; E=1e-06 ddbj:BAB07387.1; (AP001519) capsular polysaccharide biosynthesis; E=1e-06 embl:CAC06097.1; (AJ010494) ParA protein [Listeria monocytogenes]; E=3e-06 COG: BH3668; COG0489 ATPases involved in chromosome partitioning; E=1e-07 BH3027; COG2894 Septum formation inhibitor-activating ATPase; E=2e-06 BS_ywqD; COG0489 ATPases involved in chromosome partitioning; E=2e-06 PFAM: PF00991; ParA family ATPase; E=0.49.
       0.493
Your Current Organism:
Rhodopirellula baltica
NCBI taxonomy Id: 243090
Other names: Pirellula sp. 1, R. baltica SH 1, Rhodopirellula baltica SH 1, Rhodopirellula baltica str. SH 1, Rhodopirellula baltica strain SH 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.