STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB8070Hypothetical protein. (59 aa)    
Predicted Functional Partners:
RB8068
Hypothetical protein-signal peptide and transmembrane prediction.
       0.773
RB8064
Hypothetical protein.
       0.560
RB8065
Hypothetical protein.
       0.560
RB8066
Hypothetical protein.
       0.560
RB8067
Hypothetical protein.
       0.560
RB8071
Similar to spectrin alpha chain; PMID: 2808524 PMID: 8276898 PMID: 2497103 best DB hits: BLAST: swissprot:P13395; SPCA_DROME SPECTRIN ALPHA CHAIN ----- pir:; E=0.46 gb:AAF47569.1; (AE003472) alpha-Spec gene product [alt 2]; E=0.46.
       0.501
Your Current Organism:
Rhodopirellula baltica
NCBI taxonomy Id: 243090
Other names: Pirellula sp. 1, R. baltica SH 1, Rhodopirellula baltica SH 1, Rhodopirellula baltica str. SH 1, Rhodopirellula baltica strain SH 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.