Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RB7663 | comE | RB7663 | RB9840 | Conserved hypothetical protein-containing P-loop; Best DB hits: BLAST: swissprot:O83845; Y875_TREPA HYPOTHETICAL PROTEIN TP0875 -----; E=1e-09 pir:H72229; conserved hypothetical protein - Thermotoga maritima; E=2e-08 ddbj:BAB04264.1; (AP001508) BH0545~unknown conserved protein; E=1e-05 COG: TP0875; COG0802 Predicted ATPase or kinase; E=1e-10 PFAM: PF02367; Uncharacterised P-loop hydrolase UPF; E=3.9e-22. | PMID: 7968523 best DB hits: BLAST: pir:B75346; probable competence protein ComECRec2 - Deinococcus; E=2e-19 ddbj:BAA12454.1; (D84432) ComEC [Bacillus subtilis] -----; E=3e-19 swissprot:P39695; CME3_BACSU COME OPERON PROTEIN 3 ----- pir:; E=1e-18 COG: DR1854_2; COG2333 Predicted hydrolases of metallo-beta-lactamase; E=3e-16 BH1335_1; COG0658 Predicted multitransmembrane, metal-binding; E=5e-13 PA2984_2; COG2333 Predicted hydrolases of metallo-beta-lactamase; E=5e-09 PFAM: PF00753; Metallo-beta-lactamase superfamil; E=1.5e-07. | 0.409 |
| RB7663 | nnrD | RB7663 | RB8287 | Conserved hypothetical protein-containing P-loop; Best DB hits: BLAST: swissprot:O83845; Y875_TREPA HYPOTHETICAL PROTEIN TP0875 -----; E=1e-09 pir:H72229; conserved hypothetical protein - Thermotoga maritima; E=2e-08 ddbj:BAB04264.1; (AP001508) BH0545~unknown conserved protein; E=1e-05 COG: TP0875; COG0802 Predicted ATPase or kinase; E=1e-10 PFAM: PF02367; Uncharacterised P-loop hydrolase UPF; E=3.9e-22. | Conserved hypothetical protein-putative sugar kinase; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. | 0.500 |
| RB8284 | nnrD | RB8284 | RB8287 | Conserved hypothetical protein-putative a phopsphoesterase or an exonuclease; PMID: 98196666 best DB hits: BLAST: pir:F70440; conserved hypothetical protein aq_1630 - Aquifex; E=3e-18 pir:D71323; conserved hypothetical protein TP0436 - syphilis; E=3e-18 pir:F69999; conserved hypothetical protein ytqI - Bacillus subtilis; E=1e-16 COG: aq_1630; COG0618 Exopolyphosphatase-related proteins; E=3e-19 PFAM: PF01368; DHH family; E=2.4e-12 PF02272; DHHA1 domain; E=2.2e-06. | Conserved hypothetical protein-putative sugar kinase; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. | 0.521 |
| RB8284 | ribF | RB8284 | RB8286 | Conserved hypothetical protein-putative a phopsphoesterase or an exonuclease; PMID: 98196666 best DB hits: BLAST: pir:F70440; conserved hypothetical protein aq_1630 - Aquifex; E=3e-18 pir:D71323; conserved hypothetical protein TP0436 - syphilis; E=3e-18 pir:F69999; conserved hypothetical protein ytqI - Bacillus subtilis; E=1e-16 COG: aq_1630; COG0618 Exopolyphosphatase-related proteins; E=3e-19 PFAM: PF01368; DHH family; E=2.4e-12 PF02272; DHHA1 domain; E=2.2e-06. | Probable riboflavin kinase (FAD synthetase); PMID: 7772835 PMID: 3023344 best DB hits: BLAST: pir:T35984; probable riboflavin kinase (FAD synthetase) -; E=3e-46 pir:C83077; riboflavin kinaseFAD synthase PA4561 [imported] -; E=4e-42 pir:C82293; riboflavin kinaseFMN adenylyltransferase VC0681; E=2e-41 COG: PA4561; COG0196 FAD synthase; E=4e-43 PFAM: PF01687; Riboflavin kinase / FAD synthetase; E=3.3e-32; Belongs to the ribF family. | 0.765 |
| RB8290 | nnrD | RB8290 | RB8287 | Conserved hypothetical protein-putative potassium channel; PMID: 8170937 best DB hits: BLAST: pir:S76018; hypothetical protein - Synechocystis sp. (strain PCC; E=2e-61 swissprot:Q58752; YD57_METJA PUTATIVE POTASSIUM CHANNEL PROTEIN; E=1e-36 swissprot:Q57604; Y13B_METJA PUTATIVE POTASSIUM CHANNEL PROTEIN; E=2e-34 COG: sll0536; COG1226 Kef-type K+ transport systems, predicted; E=1e-62 MJ1357; COG1226 Kef-type K+ transport systems, predicted NAD-binding; E=1e-37 MJ0138.1; COG1226 Kef-type K+ transport systems, predicted; E=2e-35 PFAM: PF00520; Ion transport protein; E=0.45 PF02254; KTN NA [...] | Conserved hypothetical protein-putative sugar kinase; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. | 0.530 |
| comE | RB7663 | RB9840 | RB7663 | PMID: 7968523 best DB hits: BLAST: pir:B75346; probable competence protein ComECRec2 - Deinococcus; E=2e-19 ddbj:BAA12454.1; (D84432) ComEC [Bacillus subtilis] -----; E=3e-19 swissprot:P39695; CME3_BACSU COME OPERON PROTEIN 3 ----- pir:; E=1e-18 COG: DR1854_2; COG2333 Predicted hydrolases of metallo-beta-lactamase; E=3e-16 BH1335_1; COG0658 Predicted multitransmembrane, metal-binding; E=5e-13 PA2984_2; COG2333 Predicted hydrolases of metallo-beta-lactamase; E=5e-09 PFAM: PF00753; Metallo-beta-lactamase superfamil; E=1.5e-07. | Conserved hypothetical protein-containing P-loop; Best DB hits: BLAST: swissprot:O83845; Y875_TREPA HYPOTHETICAL PROTEIN TP0875 -----; E=1e-09 pir:H72229; conserved hypothetical protein - Thermotoga maritima; E=2e-08 ddbj:BAB04264.1; (AP001508) BH0545~unknown conserved protein; E=1e-05 COG: TP0875; COG0802 Predicted ATPase or kinase; E=1e-10 PFAM: PF02367; Uncharacterised P-loop hydrolase UPF; E=3.9e-22. | 0.409 |
| comE | nnrD | RB9840 | RB8287 | PMID: 7968523 best DB hits: BLAST: pir:B75346; probable competence protein ComECRec2 - Deinococcus; E=2e-19 ddbj:BAA12454.1; (D84432) ComEC [Bacillus subtilis] -----; E=3e-19 swissprot:P39695; CME3_BACSU COME OPERON PROTEIN 3 ----- pir:; E=1e-18 COG: DR1854_2; COG2333 Predicted hydrolases of metallo-beta-lactamase; E=3e-16 BH1335_1; COG0658 Predicted multitransmembrane, metal-binding; E=5e-13 PA2984_2; COG2333 Predicted hydrolases of metallo-beta-lactamase; E=5e-09 PFAM: PF00753; Metallo-beta-lactamase superfamil; E=1.5e-07. | Conserved hypothetical protein-putative sugar kinase; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. | 0.430 |
| nnrD | RB7663 | RB8287 | RB7663 | Conserved hypothetical protein-putative sugar kinase; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. | Conserved hypothetical protein-containing P-loop; Best DB hits: BLAST: swissprot:O83845; Y875_TREPA HYPOTHETICAL PROTEIN TP0875 -----; E=1e-09 pir:H72229; conserved hypothetical protein - Thermotoga maritima; E=2e-08 ddbj:BAB04264.1; (AP001508) BH0545~unknown conserved protein; E=1e-05 COG: TP0875; COG0802 Predicted ATPase or kinase; E=1e-10 PFAM: PF02367; Uncharacterised P-loop hydrolase UPF; E=3.9e-22. | 0.500 |
| nnrD | RB8284 | RB8287 | RB8284 | Conserved hypothetical protein-putative sugar kinase; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. | Conserved hypothetical protein-putative a phopsphoesterase or an exonuclease; PMID: 98196666 best DB hits: BLAST: pir:F70440; conserved hypothetical protein aq_1630 - Aquifex; E=3e-18 pir:D71323; conserved hypothetical protein TP0436 - syphilis; E=3e-18 pir:F69999; conserved hypothetical protein ytqI - Bacillus subtilis; E=1e-16 COG: aq_1630; COG0618 Exopolyphosphatase-related proteins; E=3e-19 PFAM: PF01368; DHH family; E=2.4e-12 PF02272; DHHA1 domain; E=2.2e-06. | 0.521 |
| nnrD | RB8290 | RB8287 | RB8290 | Conserved hypothetical protein-putative sugar kinase; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. | Conserved hypothetical protein-putative potassium channel; PMID: 8170937 best DB hits: BLAST: pir:S76018; hypothetical protein - Synechocystis sp. (strain PCC; E=2e-61 swissprot:Q58752; YD57_METJA PUTATIVE POTASSIUM CHANNEL PROTEIN; E=1e-36 swissprot:Q57604; Y13B_METJA PUTATIVE POTASSIUM CHANNEL PROTEIN; E=2e-34 COG: sll0536; COG1226 Kef-type K+ transport systems, predicted; E=1e-62 MJ1357; COG1226 Kef-type K+ transport systems, predicted NAD-binding; E=1e-37 MJ0138.1; COG1226 Kef-type K+ transport systems, predicted; E=2e-35 PFAM: PF00520; Ion transport protein; E=0.45 PF02254; KTN NA [...] | 0.530 |
| nnrD | comE | RB8287 | RB9840 | Conserved hypothetical protein-putative sugar kinase; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. | PMID: 7968523 best DB hits: BLAST: pir:B75346; probable competence protein ComECRec2 - Deinococcus; E=2e-19 ddbj:BAA12454.1; (D84432) ComEC [Bacillus subtilis] -----; E=3e-19 swissprot:P39695; CME3_BACSU COME OPERON PROTEIN 3 ----- pir:; E=1e-18 COG: DR1854_2; COG2333 Predicted hydrolases of metallo-beta-lactamase; E=3e-16 BH1335_1; COG0658 Predicted multitransmembrane, metal-binding; E=5e-13 PA2984_2; COG2333 Predicted hydrolases of metallo-beta-lactamase; E=5e-09 PFAM: PF00753; Metallo-beta-lactamase superfamil; E=1.5e-07. | 0.430 |
| nnrD | nnrE | RB8287 | RB9218 | Conserved hypothetical protein-putative sugar kinase; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. | Conserved hypothetical protein; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family. | 0.984 |
| nnrD | ribF | RB8287 | RB8286 | Conserved hypothetical protein-putative sugar kinase; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. | Probable riboflavin kinase (FAD synthetase); PMID: 7772835 PMID: 3023344 best DB hits: BLAST: pir:T35984; probable riboflavin kinase (FAD synthetase) -; E=3e-46 pir:C83077; riboflavin kinaseFAD synthase PA4561 [imported] -; E=4e-42 pir:C82293; riboflavin kinaseFMN adenylyltransferase VC0681; E=2e-41 COG: PA4561; COG0196 FAD synthase; E=4e-43 PFAM: PF01687; Riboflavin kinase / FAD synthetase; E=3.3e-32; Belongs to the ribF family. | 0.518 |
| nnrE | nnrD | RB9218 | RB8287 | Conserved hypothetical protein; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family. | Conserved hypothetical protein-putative sugar kinase; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. | 0.984 |
| ribF | RB8284 | RB8286 | RB8284 | Probable riboflavin kinase (FAD synthetase); PMID: 7772835 PMID: 3023344 best DB hits: BLAST: pir:T35984; probable riboflavin kinase (FAD synthetase) -; E=3e-46 pir:C83077; riboflavin kinaseFAD synthase PA4561 [imported] -; E=4e-42 pir:C82293; riboflavin kinaseFMN adenylyltransferase VC0681; E=2e-41 COG: PA4561; COG0196 FAD synthase; E=4e-43 PFAM: PF01687; Riboflavin kinase / FAD synthetase; E=3.3e-32; Belongs to the ribF family. | Conserved hypothetical protein-putative a phopsphoesterase or an exonuclease; PMID: 98196666 best DB hits: BLAST: pir:F70440; conserved hypothetical protein aq_1630 - Aquifex; E=3e-18 pir:D71323; conserved hypothetical protein TP0436 - syphilis; E=3e-18 pir:F69999; conserved hypothetical protein ytqI - Bacillus subtilis; E=1e-16 COG: aq_1630; COG0618 Exopolyphosphatase-related proteins; E=3e-19 PFAM: PF01368; DHH family; E=2.4e-12 PF02272; DHHA1 domain; E=2.2e-06. | 0.765 |
| ribF | nnrD | RB8286 | RB8287 | Probable riboflavin kinase (FAD synthetase); PMID: 7772835 PMID: 3023344 best DB hits: BLAST: pir:T35984; probable riboflavin kinase (FAD synthetase) -; E=3e-46 pir:C83077; riboflavin kinaseFAD synthase PA4561 [imported] -; E=4e-42 pir:C82293; riboflavin kinaseFMN adenylyltransferase VC0681; E=2e-41 COG: PA4561; COG0196 FAD synthase; E=4e-43 PFAM: PF01687; Riboflavin kinase / FAD synthetase; E=3.3e-32; Belongs to the ribF family. | Conserved hypothetical protein-putative sugar kinase; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. | 0.518 |