STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB9767Hypothetical protein. (97 aa)    
Predicted Functional Partners:
RB9766
Putative ATPase; PMID: 11544236 best DB hits: BLAST: gb:AAK02043.1; AF261825_12 (AF261825) putative ATPase [Salmonella; E=3e-67 swissprot:P55530; Y4KL_RHISN HYPOTHETICAL 37.6 KD AAA-FAMILY; E=2e-41 gb:AAA64864.1; (U23723) orf300 [Escherichia coli]; E=9e-32 COG: HP1069; COG0465 ATP-dependent Zn proteases; E=4e-24 AF0477; COG0464 ATPases of the AAA+ class; E=3e-23 Cj1116c; COG0465 ATP-dependent Zn proteases; E=5e-22 PFAM: PF00406; Adenylate kinase; E=0.57 PF00071; Ras family; E=0.09 PF01202; Shikimate kinase; E=0.028.
       0.572
RB9765
Putative subtilisin proteinase-like protein; PMID: 11544236 best DB hits: BLAST: gb:AAK02042.1; AF261825_11 (AF261825) hypothetical protein; E=2e-97 PFAM: PF02662; Methyl-viologen-reducing hydrogenase; E=0.091.
       0.554
Your Current Organism:
Rhodopirellula baltica
NCBI taxonomy Id: 243090
Other names: Pirellula sp. 1, R. baltica SH 1, Rhodopirellula baltica SH 1, Rhodopirellula baltica str. SH 1, Rhodopirellula baltica strain SH 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.