smg protein (Acidithiobacillus ferrooxidans)

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[Homology]

Score

smg

Smg family protein; Belongs to the Smg family. (146 aa)

Predicted Functional Partners:

topA

0.858

AFE_0017

0.799

AFE_0018

0.799

AFE_0014

0.773

zapD

0.729

AFE_2316

0.682

holC

0.676

AFE_0549

0.666

AFE_0022

0.620

fmt

0.604

Your Current Organism:

Acidithiobacillus ferrooxidans

NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFE_0014	AFE_0017	AFE_0014	AFE_0017	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	DNA processing protein DprA, putative; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	0.773
AFE_0014	AFE_0018	AFE_0014	AFE_0018	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	LysM domain protein; Identified by match to protein family HMM PF01476.	0.773
AFE_0014	AFE_0022	AFE_0014	AFE_0022	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	Hypothetical protein; Identified by glimmer; putative.	0.551
AFE_0014	fmt	AFE_0014	AFE_0020	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.	0.551
AFE_0014	smg	AFE_0014	AFE_0016	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	Smg family protein; Belongs to the Smg family.	0.773
AFE_0014	topA	AFE_0014	AFE_0015	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]	0.773
AFE_0017	AFE_0014	AFE_0017	AFE_0014	DNA processing protein DprA, putative; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	0.773
AFE_0017	AFE_0018	AFE_0017	AFE_0018	DNA processing protein DprA, putative; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	LysM domain protein; Identified by match to protein family HMM PF01476.	0.805
AFE_0017	AFE_0022	AFE_0017	AFE_0022	DNA processing protein DprA, putative; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	Hypothetical protein; Identified by glimmer; putative.	0.604
AFE_0017	fmt	AFE_0017	AFE_0020	DNA processing protein DprA, putative; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.	0.685
AFE_0017	smg	AFE_0017	AFE_0016	DNA processing protein DprA, putative; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	Smg family protein; Belongs to the Smg family.	0.799
AFE_0017	topA	AFE_0017	AFE_0015	DNA processing protein DprA, putative; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]	0.892
AFE_0018	AFE_0014	AFE_0018	AFE_0014	LysM domain protein; Identified by match to protein family HMM PF01476.	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	0.773
AFE_0018	AFE_0017	AFE_0018	AFE_0017	LysM domain protein; Identified by match to protein family HMM PF01476.	DNA processing protein DprA, putative; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	0.805
AFE_0018	AFE_0022	AFE_0018	AFE_0022	LysM domain protein; Identified by match to protein family HMM PF01476.	Hypothetical protein; Identified by glimmer; putative.	0.604
AFE_0018	fmt	AFE_0018	AFE_0020	LysM domain protein; Identified by match to protein family HMM PF01476.	methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.	0.604
AFE_0018	smg	AFE_0018	AFE_0016	LysM domain protein; Identified by match to protein family HMM PF01476.	Smg family protein; Belongs to the Smg family.	0.799
AFE_0018	topA	AFE_0018	AFE_0015	LysM domain protein; Identified by match to protein family HMM PF01476.	DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]	0.828
AFE_0022	AFE_0014	AFE_0022	AFE_0014	Hypothetical protein; Identified by glimmer; putative.	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	0.551
AFE_0022	AFE_0017	AFE_0022	AFE_0017	Hypothetical protein; Identified by glimmer; putative.	DNA processing protein DprA, putative; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	0.604