doxD_1 protein (Acidithiobacillus ferrooxidans)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Score

doxD_1

Identified by match to protein family HMM PF07681. (360 aa)

Predicted Functional Partners:

tetH

0.981

doxD_2

0.902

AFE_0026

0.757

AFE_0050

0.748

AFE_0027

0.701

AFE_0969

0.692

AFE_2677

0.666

AFE_3099

0.642

AFE_3115

0.639

AFE_0458

0.620

Your Current Organism:

Acidithiobacillus ferrooxidans

NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFE_0026	AFE_0027	AFE_0026	AFE_0027	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Sigma-54 dependent transcriptional regulator/response regulator; Identified by similarity to SP:Q06065; match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954.	0.960
AFE_0026	AFE_0050	AFE_0026	AFE_0050	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Tat (twin-arginine translocation) pathway signal sequence domain protein; Identified by match to protein family HMM TIGR01409.	0.440
AFE_0026	doxD_1	AFE_0026	AFE_0048	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Identified by match to protein family HMM PF07681.	0.757
AFE_0026	doxD_2	AFE_0026	AFE_0044	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Identified by match to protein family HMM PF07681.	0.751
AFE_0026	tetH	AFE_0026	AFE_0029	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Tetrathionate hydrolase; Catalyzes the hydrolysis of tetrathionate to generate elemental sulfur, thiosulfate and sulfate.	0.540
AFE_0027	AFE_0026	AFE_0027	AFE_0026	Sigma-54 dependent transcriptional regulator/response regulator; Identified by similarity to SP:Q06065; match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954.	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.960
AFE_0027	AFE_0050	AFE_0027	AFE_0050	Sigma-54 dependent transcriptional regulator/response regulator; Identified by similarity to SP:Q06065; match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954.	Tat (twin-arginine translocation) pathway signal sequence domain protein; Identified by match to protein family HMM TIGR01409.	0.447
AFE_0027	doxD_1	AFE_0027	AFE_0048	Sigma-54 dependent transcriptional regulator/response regulator; Identified by similarity to SP:Q06065; match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954.	Identified by match to protein family HMM PF07681.	0.701
AFE_0027	doxD_2	AFE_0027	AFE_0044	Sigma-54 dependent transcriptional regulator/response regulator; Identified by similarity to SP:Q06065; match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954.	Identified by match to protein family HMM PF07681.	0.607
AFE_0027	tetH	AFE_0027	AFE_0029	Sigma-54 dependent transcriptional regulator/response regulator; Identified by similarity to SP:Q06065; match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954.	Tetrathionate hydrolase; Catalyzes the hydrolysis of tetrathionate to generate elemental sulfur, thiosulfate and sulfate.	0.461
AFE_0050	AFE_0026	AFE_0050	AFE_0026	Tat (twin-arginine translocation) pathway signal sequence domain protein; Identified by match to protein family HMM TIGR01409.	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.440
AFE_0050	AFE_0027	AFE_0050	AFE_0027	Tat (twin-arginine translocation) pathway signal sequence domain protein; Identified by match to protein family HMM TIGR01409.	Sigma-54 dependent transcriptional regulator/response regulator; Identified by similarity to SP:Q06065; match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954.	0.447
AFE_0050	doxD_1	AFE_0050	AFE_0048	Tat (twin-arginine translocation) pathway signal sequence domain protein; Identified by match to protein family HMM TIGR01409.	Identified by match to protein family HMM PF07681.	0.748
AFE_0050	doxD_2	AFE_0050	AFE_0044	Tat (twin-arginine translocation) pathway signal sequence domain protein; Identified by match to protein family HMM TIGR01409.	Identified by match to protein family HMM PF07681.	0.440
AFE_0458	AFE_0969	AFE_0458	AFE_0969	Rare lipoprotein B, putative; Identified by similarity to SP:P10101.	Type IV pilin, putative; Identified by match to protein family HMM TIGR02532.	0.749
AFE_0458	AFE_2677	AFE_0458	AFE_2677	Rare lipoprotein B, putative; Identified by similarity to SP:P10101.	3-deoxy-D-manno-octulosonic-acid transferase domain protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.	0.672
AFE_0458	AFE_3099	AFE_0458	AFE_3099	Rare lipoprotein B, putative; Identified by similarity to SP:P10101.	Hypothetical protein; Identified by glimmer; putative.	0.689
AFE_0458	AFE_3115	AFE_0458	AFE_3115	Rare lipoprotein B, putative; Identified by similarity to SP:P10101.	Conserved hypothetical protein; Identified by similarity to SP:O67860.	0.507
AFE_0458	doxD_1	AFE_0458	AFE_0048	Rare lipoprotein B, putative; Identified by similarity to SP:P10101.	Identified by match to protein family HMM PF07681.	0.620
AFE_0458	doxD_2	AFE_0458	AFE_0044	Rare lipoprotein B, putative; Identified by similarity to SP:P10101.	Identified by match to protein family HMM PF07681.	0.645