Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AFE_0078Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535. (327 aa)    
Predicted Functional Partners:
AFE_0079
Glycosyltransferase, putative; Identified by similarity to PIR:E96008; match to protein family HMM PF00534.
  
    0.776
AFE_0080
Membrane protein, putative.
       0.737
mtfA
Mannosyltransferase; Identified by similarity to GB:AAF04384.1; match to protein family HMM PF00534.
  
    0.736
AFE_0076
Polysaccharide biosynthesis protein; Identified by similarity to SP:P37781; match to protein family HMM PF01943.
 
  
 0.720
AFE_0077
Conserved hypothetical protein; Identified by similarity to GB:AAN49860.1; match to protein family HMM PF08241; match to protein family HMM PF08242.
  
    0.596
AFE_0082
O antigen biosynthesis rhamnosyltransferase, putative; Identified by similarity to SP:P26403; match to protein family HMM PF00535.
       0.547
AFE_1340
Tyrosine-protein kinase, putative; Identified by similarity to SP:P38134; match to protein family HMM PF02706.
  
  
 0.493
AFE_1366
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Identified by similarity to SP:P29956; match to protein family HMM PF00483; match to protein family HMM PF01050; match to protein family HMM PF07883; match to protein family HMM TIGR01479; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.441
AFE_2960
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Identified by match to protein family HMM PF00483; match to protein family HMM PF01050; match to protein family HMM PF07883; match to protein family HMM TIGR01479; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.441
AFE_3293
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Identified by similarity to SP:P29956; match to protein family HMM PF00483; match to protein family HMM PF01050; match to protein family HMM PF07883; match to protein family HMM TIGR01479; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.441
Your Current Organism:
Acidithiobacillus ferrooxidans
NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270
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