Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
AFE_0079Glycosyltransferase, putative; Identified by similarity to PIR:E96008; match to protein family HMM PF00534. (403 aa)    
Predicted Functional Partners:
mtfA
Mannosyltransferase; Identified by similarity to GB:AAF04384.1; match to protein family HMM PF00534.
 
     0.905
AFE_0078
Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535.
  
    0.776
AFE_0080
Membrane protein, putative.
       0.732
AFE_0076
Polysaccharide biosynthesis protein; Identified by similarity to SP:P37781; match to protein family HMM PF01943.
  
    0.668
AFE_0077
Conserved hypothetical protein; Identified by similarity to GB:AAN49860.1; match to protein family HMM PF08241; match to protein family HMM PF08242.
 
     0.642
AFE_0082
O antigen biosynthesis rhamnosyltransferase, putative; Identified by similarity to SP:P26403; match to protein family HMM PF00535.
  
    0.563
AFE_0073
Undecaprenyl-phosphate galactosephosphotransferase; Identified by similarity to SP:P26406; match to protein family HMM PF02397; match to protein family HMM TIGR03022; match to protein family HMM TIGR03025.
 
    0.447
AFE_2082
Identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02402.
   
  0.435
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
  0.435
rfbB
dTDP-glucose 4,6-dehydratase; Identified by similarity to SP:P55295; match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01181; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.410
Your Current Organism:
Acidithiobacillus ferrooxidans
NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270
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