AFE_0151 protein (Acidithiobacillus ferrooxidans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Acidithiobacillus ferrooxidans

NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFE_0148	AFE_0150	AFE_0148	AFE_0150	Hypothetical protein; Identified by glimmer; putative.	Conserved hypothetical protein; Identified by similarity to GB:CAE33855.1.	0.661
AFE_0148	AFE_0151	AFE_0148	AFE_0151	Hypothetical protein; Identified by glimmer; putative.	Rhodanese-like domain protein; Identified by match to protein family HMM PF00581.	0.444
AFE_0150	AFE_0148	AFE_0150	AFE_0148	Conserved hypothetical protein; Identified by similarity to GB:CAE33855.1.	Hypothetical protein; Identified by glimmer; putative.	0.661
AFE_0150	AFE_0151	AFE_0150	AFE_0151	Conserved hypothetical protein; Identified by similarity to GB:CAE33855.1.	Rhodanese-like domain protein; Identified by match to protein family HMM PF00581.	0.510
AFE_0150	AFE_0152	AFE_0150	AFE_0152	Conserved hypothetical protein; Identified by similarity to GB:CAE33855.1.	Conserved hypothetical protein; Identified by similarity to PIR:D84128; match to protein family HMM PF04241.	0.454
AFE_0151	AFE_0148	AFE_0151	AFE_0148	Rhodanese-like domain protein; Identified by match to protein family HMM PF00581.	Hypothetical protein; Identified by glimmer; putative.	0.444
AFE_0151	AFE_0150	AFE_0151	AFE_0150	Rhodanese-like domain protein; Identified by match to protein family HMM PF00581.	Conserved hypothetical protein; Identified by similarity to GB:CAE33855.1.	0.510
AFE_0151	AFE_0152	AFE_0151	AFE_0152	Rhodanese-like domain protein; Identified by match to protein family HMM PF00581.	Conserved hypothetical protein; Identified by similarity to PIR:D84128; match to protein family HMM PF04241.	0.678
AFE_0151	AFE_0153	AFE_0151	AFE_0153	Rhodanese-like domain protein; Identified by match to protein family HMM PF00581.	Integral membrane protein; Identified by match to protein family HMM PF01988.	0.447
AFE_0151	AFE_3010	AFE_0151	AFE_3010	Rhodanese-like domain protein; Identified by match to protein family HMM PF00581.	Polyketide synthase, type I, putative; Identified by similarity to GB:AAK26474.1; match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801; match to protein family HMM PF08240; match to protein family HMM PF08659.	0.402
AFE_0151	rpS17	AFE_0151	AFE_0336	Rhodanese-like domain protein; Identified by match to protein family HMM PF00581.	Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.407
AFE_0151	sod	AFE_0151	AFE_1898	Rhodanese-like domain protein; Identified by match to protein family HMM PF00581.	Superoxide dismutase; Identified by similarity to SP:Q03300; match to protein family HMM PF02777.	0.425
AFE_0152	AFE_0150	AFE_0152	AFE_0150	Conserved hypothetical protein; Identified by similarity to PIR:D84128; match to protein family HMM PF04241.	Conserved hypothetical protein; Identified by similarity to GB:CAE33855.1.	0.454
AFE_0152	AFE_0151	AFE_0152	AFE_0151	Conserved hypothetical protein; Identified by similarity to PIR:D84128; match to protein family HMM PF04241.	Rhodanese-like domain protein; Identified by match to protein family HMM PF00581.	0.678
AFE_0152	AFE_0153	AFE_0152	AFE_0153	Conserved hypothetical protein; Identified by similarity to PIR:D84128; match to protein family HMM PF04241.	Integral membrane protein; Identified by match to protein family HMM PF01988.	0.501
AFE_0153	AFE_0151	AFE_0153	AFE_0151	Integral membrane protein; Identified by match to protein family HMM PF01988.	Rhodanese-like domain protein; Identified by match to protein family HMM PF00581.	0.447
AFE_0153	AFE_0152	AFE_0153	AFE_0152	Integral membrane protein; Identified by match to protein family HMM PF01988.	Conserved hypothetical protein; Identified by similarity to PIR:D84128; match to protein family HMM PF04241.	0.501
AFE_3010	AFE_0151	AFE_3010	AFE_0151	Polyketide synthase, type I, putative; Identified by similarity to GB:AAK26474.1; match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801; match to protein family HMM PF08240; match to protein family HMM PF08659.	Rhodanese-like domain protein; Identified by match to protein family HMM PF00581.	0.402
AFE_3010	sod	AFE_3010	AFE_1898	Polyketide synthase, type I, putative; Identified by similarity to GB:AAK26474.1; match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801; match to protein family HMM PF08240; match to protein family HMM PF08659.	Superoxide dismutase; Identified by similarity to SP:Q03300; match to protein family HMM PF02777.	0.569
rpS17	AFE_0151	AFE_0336	AFE_0151	Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	Rhodanese-like domain protein; Identified by match to protein family HMM PF00581.	0.407