AFE_0164 protein (Acidithiobacillus ferrooxidans)

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Score

AFE_0164

S4 domain protein; Identified by match to protein family HMM PF01479. (87 aa)

Predicted Functional Partners:

AFE_0538

0.928

rplS

0.881

hslO

0.878

rplQ

0.850

rpmB

0.844

rpmH

0.842

rplB

0.833

rpmA

0.829

rplT

0.828

rplU

0.825

Your Current Organism:

Acidithiobacillus ferrooxidans

NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFE_0164	AFE_0538	AFE_0164	AFE_0538	S4 domain protein; Identified by match to protein family HMM PF01479.	Conserved domain protein; Identified by match to protein family HMM PF05670.	0.928
AFE_0164	hslO	AFE_0164	AFE_1408	S4 domain protein; Identified by match to protein family HMM PF01479.	33 kDa chaperonin; Identified by similarity to SP:P45803; match to protein family HMM PF01430.	0.878
AFE_0164	rplB	AFE_0164	AFE_0330	S4 domain protein; Identified by match to protein family HMM PF01479.	Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.833
AFE_0164	rplQ	AFE_0164	AFE_0355	S4 domain protein; Identified by match to protein family HMM PF01479.	Ribosomal protein L17; Identified by similarity to SP:P02416; match to protein family HMM PF01196; match to protein family HMM TIGR00059.	0.850
AFE_0164	rplS	AFE_0164	AFE_2852	S4 domain protein; Identified by match to protein family HMM PF01479.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.881
AFE_0164	rplT	AFE_0164	AFE_2611	S4 domain protein; Identified by match to protein family HMM PF01479.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.828
AFE_0164	rplU	AFE_0164	AFE_0285	S4 domain protein; Identified by match to protein family HMM PF01479.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.825
AFE_0164	rpmA	AFE_0164	AFE_0284	S4 domain protein; Identified by match to protein family HMM PF01479.	Ribosomal protein L27; Identified by similarity to SP:P02427; match to protein family HMM PF01016; match to protein family HMM TIGR00062; Belongs to the bacterial ribosomal protein bL27 family.	0.829
AFE_0164	rpmB	AFE_0164	AFE_2670	S4 domain protein; Identified by match to protein family HMM PF01479.	Ribosomal protein L28; Identified by similarity to SP:P02428; match to protein family HMM PF00830; match to protein family HMM TIGR00009; Belongs to the bacterial ribosomal protein bL28 family.	0.844
AFE_0164	rpmH	AFE_0164	AFE_0035	S4 domain protein; Identified by match to protein family HMM PF01479.	Ribosomal protein L34; Identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family.	0.842
AFE_0538	AFE_0164	AFE_0538	AFE_0164	Conserved domain protein; Identified by match to protein family HMM PF05670.	S4 domain protein; Identified by match to protein family HMM PF01479.	0.928
AFE_0538	rplB	AFE_0538	AFE_0330	Conserved domain protein; Identified by match to protein family HMM PF05670.	Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.945
AFE_0538	rplQ	AFE_0538	AFE_0355	Conserved domain protein; Identified by match to protein family HMM PF05670.	Ribosomal protein L17; Identified by similarity to SP:P02416; match to protein family HMM PF01196; match to protein family HMM TIGR00059.	0.559
AFE_0538	rplS	AFE_0538	AFE_2852	Conserved domain protein; Identified by match to protein family HMM PF05670.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.744
AFE_0538	rplT	AFE_0538	AFE_2611	Conserved domain protein; Identified by match to protein family HMM PF05670.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.559
AFE_0538	rplU	AFE_0538	AFE_0285	Conserved domain protein; Identified by match to protein family HMM PF05670.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.559
AFE_0538	rpmA	AFE_0538	AFE_0284	Conserved domain protein; Identified by match to protein family HMM PF05670.	Ribosomal protein L27; Identified by similarity to SP:P02427; match to protein family HMM PF01016; match to protein family HMM TIGR00062; Belongs to the bacterial ribosomal protein bL27 family.	0.559
AFE_0538	rpmB	AFE_0538	AFE_2670	Conserved domain protein; Identified by match to protein family HMM PF05670.	Ribosomal protein L28; Identified by similarity to SP:P02428; match to protein family HMM PF00830; match to protein family HMM TIGR00009; Belongs to the bacterial ribosomal protein bL28 family.	0.559
AFE_0538	rpmH	AFE_0538	AFE_0035	Conserved domain protein; Identified by match to protein family HMM PF05670.	Ribosomal protein L34; Identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family.	0.559
hslO	AFE_0164	AFE_1408	AFE_0164	33 kDa chaperonin; Identified by similarity to SP:P45803; match to protein family HMM PF01430.	S4 domain protein; Identified by match to protein family HMM PF01479.	0.878