AFE_0269 protein (Acidithiobacillus ferrooxidans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Acidithiobacillus ferrooxidans

NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFE_0268	AFE_0269	AFE_0268	AFE_0269	Conserved domain protein; Identified by similarity to GB:CAD79002.1.	Identified by similarity to PIR:S74892; match to protein family HMM PF00753.	0.762
AFE_0268	AFE_0270	AFE_0268	AFE_0270	Conserved domain protein; Identified by similarity to GB:CAD79002.1.	Transcriptional regulator, Crp/Fnr family; Identified by match to protein family HMM PF00027; match to protein family HMM PF00325.	0.476
AFE_0268	sqr	AFE_0268	AFE_0267	Conserved domain protein; Identified by similarity to GB:CAD79002.1.	Sulfide quinone reductase, putative; Identified by similarity to GB:AAF72963.1; match to protein family HMM PF07992.	0.570
AFE_0268	trmB	AFE_0268	AFE_0271	Conserved domain protein; Identified by similarity to GB:CAD79002.1.	tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.476
AFE_0269	AFE_0268	AFE_0269	AFE_0268	Identified by similarity to PIR:S74892; match to protein family HMM PF00753.	Conserved domain protein; Identified by similarity to GB:CAD79002.1.	0.762
AFE_0269	AFE_0270	AFE_0269	AFE_0270	Identified by similarity to PIR:S74892; match to protein family HMM PF00753.	Transcriptional regulator, Crp/Fnr family; Identified by match to protein family HMM PF00027; match to protein family HMM PF00325.	0.487
AFE_0269	AFE_2640	AFE_0269	AFE_2640	Identified by similarity to PIR:S74892; match to protein family HMM PF00753.	Hypothetical protein; Identified by glimmer; putative.	0.437
AFE_0269	AFE_3010	AFE_0269	AFE_3010	Identified by similarity to PIR:S74892; match to protein family HMM PF00753.	Polyketide synthase, type I, putative; Identified by similarity to GB:AAK26474.1; match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801; match to protein family HMM PF08240; match to protein family HMM PF08659.	0.601
AFE_0269	sqr	AFE_0269	AFE_0267	Identified by similarity to PIR:S74892; match to protein family HMM PF00753.	Sulfide quinone reductase, putative; Identified by similarity to GB:AAF72963.1; match to protein family HMM PF07992.	0.496
AFE_0269	trmB	AFE_0269	AFE_0271	Identified by similarity to PIR:S74892; match to protein family HMM PF00753.	tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.497
AFE_0270	AFE_0268	AFE_0270	AFE_0268	Transcriptional regulator, Crp/Fnr family; Identified by match to protein family HMM PF00027; match to protein family HMM PF00325.	Conserved domain protein; Identified by similarity to GB:CAD79002.1.	0.476
AFE_0270	AFE_0269	AFE_0270	AFE_0269	Transcriptional regulator, Crp/Fnr family; Identified by match to protein family HMM PF00027; match to protein family HMM PF00325.	Identified by similarity to PIR:S74892; match to protein family HMM PF00753.	0.487
AFE_0270	AFE_3010	AFE_0270	AFE_3010	Transcriptional regulator, Crp/Fnr family; Identified by match to protein family HMM PF00027; match to protein family HMM PF00325.	Polyketide synthase, type I, putative; Identified by similarity to GB:AAK26474.1; match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801; match to protein family HMM PF08240; match to protein family HMM PF08659.	0.505
AFE_0270	trmB	AFE_0270	AFE_0271	Transcriptional regulator, Crp/Fnr family; Identified by match to protein family HMM PF00027; match to protein family HMM PF00325.	tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.773
AFE_2640	AFE_0269	AFE_2640	AFE_0269	Hypothetical protein; Identified by glimmer; putative.	Identified by similarity to PIR:S74892; match to protein family HMM PF00753.	0.437
AFE_2640	AFE_3010	AFE_2640	AFE_3010	Hypothetical protein; Identified by glimmer; putative.	Polyketide synthase, type I, putative; Identified by similarity to GB:AAK26474.1; match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801; match to protein family HMM PF08240; match to protein family HMM PF08659.	0.544
AFE_3010	AFE_0269	AFE_3010	AFE_0269	Polyketide synthase, type I, putative; Identified by similarity to GB:AAK26474.1; match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801; match to protein family HMM PF08240; match to protein family HMM PF08659.	Identified by similarity to PIR:S74892; match to protein family HMM PF00753.	0.601
AFE_3010	AFE_0270	AFE_3010	AFE_0270	Polyketide synthase, type I, putative; Identified by similarity to GB:AAK26474.1; match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801; match to protein family HMM PF08240; match to protein family HMM PF08659.	Transcriptional regulator, Crp/Fnr family; Identified by match to protein family HMM PF00027; match to protein family HMM PF00325.	0.505
AFE_3010	AFE_2640	AFE_3010	AFE_2640	Polyketide synthase, type I, putative; Identified by similarity to GB:AAK26474.1; match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801; match to protein family HMM PF08240; match to protein family HMM PF08659.	Hypothetical protein; Identified by glimmer; putative.	0.544
sqr	AFE_0268	AFE_0267	AFE_0268	Sulfide quinone reductase, putative; Identified by similarity to GB:AAF72963.1; match to protein family HMM PF07992.	Conserved domain protein; Identified by similarity to GB:CAD79002.1.	0.570