AFE_0447 protein (Acidithiobacillus ferrooxidans)

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AFE_0447

Sigma-54 dependent DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF07728. (461 aa)

Predicted Functional Partners:

AFE_0449

0.984

rpoN

0.953

AFE_2957

0.933

AFE_2955

0.906

AFE_0448

0.805

ntrB

0.632

AFE_0184

0.590

AFE_0026

0.583

AFE_0446

0.570

AFE_1595

0.492

Your Current Organism:

Acidithiobacillus ferrooxidans

NCBI taxonomy Id: 243159
Other names: A. ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans ATCC 23270, Acidithiobacillus ferrooxidans str. ATCC 23270

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFE_0026	AFE_0447	AFE_0026	AFE_0447	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Sigma-54 dependent DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF07728.	0.583
AFE_0026	AFE_1595	AFE_0026	AFE_1595	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Hypothetical protein; Identified by glimmer; putative.	0.475
AFE_0026	AFE_2955	AFE_0026	AFE_2955	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Sigma-54 dependent DNA-binding response regulator, putative; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158.	0.548
AFE_0184	AFE_0447	AFE_0184	AFE_0447	Sensor protein PilS, putative; Identified by similarity to SP:P33639; match to protein family HMM PF00512; match to protein family HMM PF02518.	Sigma-54 dependent DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF07728.	0.590
AFE_0184	AFE_1595	AFE_0184	AFE_1595	Sensor protein PilS, putative; Identified by similarity to SP:P33639; match to protein family HMM PF00512; match to protein family HMM PF02518.	Hypothetical protein; Identified by glimmer; putative.	0.468
AFE_0184	AFE_2955	AFE_0184	AFE_2955	Sensor protein PilS, putative; Identified by similarity to SP:P33639; match to protein family HMM PF00512; match to protein family HMM PF02518.	Sigma-54 dependent DNA-binding response regulator, putative; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158.	0.545
AFE_0184	rpoN	AFE_0184	AFE_3025	Sensor protein PilS, putative; Identified by similarity to SP:P33639; match to protein family HMM PF00512; match to protein family HMM PF02518.	RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.928
AFE_0446	AFE_0447	AFE_0446	AFE_0447	Conserved hypothetical protein; Identified by similarity to GB:AAO91056.1.	Sigma-54 dependent DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF07728.	0.570
AFE_0446	AFE_0448	AFE_0446	AFE_0448	Conserved hypothetical protein; Identified by similarity to GB:AAO91056.1.	Lipoprotein, putative.	0.570
AFE_0446	AFE_0449	AFE_0446	AFE_0449	Conserved hypothetical protein; Identified by similarity to GB:AAO91056.1.	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.570
AFE_0447	AFE_0026	AFE_0447	AFE_0026	Sigma-54 dependent DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF07728.	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.583
AFE_0447	AFE_0184	AFE_0447	AFE_0184	Sigma-54 dependent DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF07728.	Sensor protein PilS, putative; Identified by similarity to SP:P33639; match to protein family HMM PF00512; match to protein family HMM PF02518.	0.590
AFE_0447	AFE_0446	AFE_0447	AFE_0446	Sigma-54 dependent DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF07728.	Conserved hypothetical protein; Identified by similarity to GB:AAO91056.1.	0.570
AFE_0447	AFE_0448	AFE_0447	AFE_0448	Sigma-54 dependent DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF07728.	Lipoprotein, putative.	0.805
AFE_0447	AFE_0449	AFE_0447	AFE_0449	Sigma-54 dependent DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF07728.	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.984
AFE_0447	AFE_1595	AFE_0447	AFE_1595	Sigma-54 dependent DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF07728.	Hypothetical protein; Identified by glimmer; putative.	0.492
AFE_0447	AFE_2955	AFE_0447	AFE_2955	Sigma-54 dependent DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF07728.	Sigma-54 dependent DNA-binding response regulator, putative; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158.	0.906
AFE_0447	AFE_2957	AFE_0447	AFE_2957	Sigma-54 dependent DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF07728.	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.933
AFE_0447	ntrB	AFE_0447	AFE_2902	Sigma-54 dependent DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF07728.	Nitrogen regulation protein NR(II); Identified by similarity to SP:P06218; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF08448.	0.632
AFE_0447	rpoN	AFE_0447	AFE_3025	Sigma-54 dependent DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF07728.	RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.953

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